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The map label for this gene is ykgF [H]

Identifier: 32266150

GI number: 32266150

Start: 629756

End: 631195

Strand: Direct

Name: ykgF [H]

Synonym: HH0651

Alternate gene names: 32266150

Gene position: 629756-631195 (Clockwise)

Preceding gene: 32266149

Following gene: 32266151

Centisome position: 35.0

GC content: 38.47

Gene sequence:

>1440_bases
ATGAGCCATCAAGAACATACCAATATCGTCCATACCAAACTCAATGACAAACAACTCCGCACTAACCTTAAGAGTGTAAT
GGACACCCTTAAAGGGAATCGTAAGAATCTTATCTCTTCTCGTTATATAGATTGGGAGGCTTTACGTGAGCAAGGAAGAG
CGGTTAAACAAAAAACTCTCTCTCAACTTGATACTCTCCTTGAACGTTTTGAACAAAATGCTACAAAAAATGGATTCATT
GTGCATTGGGCACGCGATAGCAAAGAAACAAATGAGATTATTTATAATCTTATGAGAGAGAAAAATATCACTAAGATTCT
CAAAGGCAAATCTATGGCGAGCGAGGAGACGCATCTTAATGCTTTTTTAAAGCAAAAAGGTATTAATCCCATTGAAACAG
ATTTGGGTGAGCTTATCATTCAACTTATTGATGAGCCACCTGTGCATATTGTCGCCCCAGCTATTCATAAAAACCGCTAT
CAAATCGGCGAAATATTCCAACAAAAACTTGGTGCAAACTTAGAATCTGAACCAGAAAAACTCAACGAAATCGCTCGTGT
GCATTTGCGTAAAGAATTTCAAGAATTTAAAATGGGACTAAGTGGGGTTAATTTTGCTATTGCTAATGAGGGAGCAATTT
GGCTCATTGAAAATGAAGGCAATGGGCGTATGAGCACTACTGCAAGTGATATTCATATAGCTATTTGTGGCATTGAAAAG
ATTGTGGAGAGTTTTGAAGATGCTTCTATTCTTGACACACTCCTTGTGCCTTCAGCTACAGGCGCACCCATTACTTGTTA
CAATAACATTATTACTTCTCCACGCAAAAATGGCGAGCTAGATGGTCCCAAAGAAGTGCATATTATCCTCCTTGATAATA
ATCGCTCAACCATACTTAAAGATGCGCATTTTTACCGCTCTCTTTCTTGTATCCGATGTGGCACTTGTCTCAATCATTGC
CCTGTATATGACAAAATCGGAGGACACGCTTATCTTAGCACTTATCCTGGACCTATTGGTGAAGTAATTTCTCCACAGCT
TTTTGGTATGAAAAATTTTGGACATATGGTGAATCTTTGCTCACTCTGCGGACGATGTAGTGAAGTATGTCCTGTGAAGA
TTCCGCTTGCAGAGCTTATTCGTGATTTGCGTAGTGAAAAAGTAGGGCAAGGACGCAAGAATCTTAAAAATAATGATGGC
TCATTGCGTGATAAAGGTGAGGAATATGCAATGAAACAATTTGCTAATGCTGCAACTAATGGTGATGCTTGGCGTGAATT
ATTGAATTTGCCAAACAAGCCTCTACTTATGCCTCTAGTAAAGCTTTTTAGTGGATTTATACCCGGGCTTAAAAATTGGG
TGGCTTATCGCACTTTCCCTACTTTAAATGGGAATCTCCATAAAAAAATATCACATATGAAAGGAGTAATTTATGAGTAA

Upstream 100 bases:

>100_bases
TACTTAATATCAGCGGGGCAATGCAAAAGCAAAAAATCGCTGTCAAACCCATTCATCTCTATGATTTCTTAGCCCAAAGA
ATCGGATTAGGAGCATAATT

Downstream 100 bases:

>100_bases
GCAAGCTATTTTAGACAATATCAAAGCCTCACTTCAGGCTAATCCGCTTCATACAGAATCCTCGCATTATGCTAATCCGA
TGAAAAGCACAAATTCTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 479; Mature: 478

Protein sequence:

>479_residues
MSHQEHTNIVHTKLNDKQLRTNLKSVMDTLKGNRKNLISSRYIDWEALREQGRAVKQKTLSQLDTLLERFEQNATKNGFI
VHWARDSKETNEIIYNLMREKNITKILKGKSMASEETHLNAFLKQKGINPIETDLGELIIQLIDEPPVHIVAPAIHKNRY
QIGEIFQQKLGANLESEPEKLNEIARVHLRKEFQEFKMGLSGVNFAIANEGAIWLIENEGNGRMSTTASDIHIAICGIEK
IVESFEDASILDTLLVPSATGAPITCYNNIITSPRKNGELDGPKEVHIILLDNNRSTILKDAHFYRSLSCIRCGTCLNHC
PVYDKIGGHAYLSTYPGPIGEVISPQLFGMKNFGHMVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQGRKNLKNNDG
SLRDKGEEYAMKQFANAATNGDAWRELLNLPNKPLLMPLVKLFSGFIPGLKNWVAYRTFPTLNGNLHKKISHMKGVIYE

Sequences:

>Translated_479_residues
MSHQEHTNIVHTKLNDKQLRTNLKSVMDTLKGNRKNLISSRYIDWEALREQGRAVKQKTLSQLDTLLERFEQNATKNGFI
VHWARDSKETNEIIYNLMREKNITKILKGKSMASEETHLNAFLKQKGINPIETDLGELIIQLIDEPPVHIVAPAIHKNRY
QIGEIFQQKLGANLESEPEKLNEIARVHLRKEFQEFKMGLSGVNFAIANEGAIWLIENEGNGRMSTTASDIHIAICGIEK
IVESFEDASILDTLLVPSATGAPITCYNNIITSPRKNGELDGPKEVHIILLDNNRSTILKDAHFYRSLSCIRCGTCLNHC
PVYDKIGGHAYLSTYPGPIGEVISPQLFGMKNFGHMVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQGRKNLKNNDG
SLRDKGEEYAMKQFANAATNGDAWRELLNLPNKPLLMPLVKLFSGFIPGLKNWVAYRTFPTLNGNLHKKISHMKGVIYE
>Mature_478_residues
SHQEHTNIVHTKLNDKQLRTNLKSVMDTLKGNRKNLISSRYIDWEALREQGRAVKQKTLSQLDTLLERFEQNATKNGFIV
HWARDSKETNEIIYNLMREKNITKILKGKSMASEETHLNAFLKQKGINPIETDLGELIIQLIDEPPVHIVAPAIHKNRYQ
IGEIFQQKLGANLESEPEKLNEIARVHLRKEFQEFKMGLSGVNFAIANEGAIWLIENEGNGRMSTTASDIHIAICGIEKI
VESFEDASILDTLLVPSATGAPITCYNNIITSPRKNGELDGPKEVHIILLDNNRSTILKDAHFYRSLSCIRCGTCLNHCP
VYDKIGGHAYLSTYPGPIGEVISPQLFGMKNFGHMVNLCSLCGRCSEVCPVKIPLAELIRDLRSEKVGQGRKNLKNNDGS
LRDKGEEYAMKQFANAATNGDAWRELLNLPNKPLLMPLVKLFSGFIPGLKNWVAYRTFPTLNGNLHKKISHMKGVIYE

Specific function: Unknown

COG id: COG1139

COG function: function code C; Uncharacterized conserved protein containing a ferredoxin-like domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1786498, Length=464, Percent_Identity=37.7155172413793, Blast_Score=335, Evalue=3e-93,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR003741
- InterPro:   IPR004452
- InterPro:   IPR002698
- InterPro:   IPR012285
- InterPro:   IPR009051 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 53932; Mature: 53801

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHQEHTNIVHTKLNDKQLRTNLKSVMDTLKGNRKNLISSRYIDWEALREQGRAVKQKTL
CCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
SQLDTLLERFEQNATKNGFIVHWARDSKETNEIIYNLMREKNITKILKGKSMASEETHLN
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AFLKQKGINPIETDLGELIIQLIDEPPVHIVAPAIHKNRYQIGEIFQQKLGANLESEPEK
HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCHHH
LNEIARVHLRKEFQEFKMGLSGVNFAIANEGAIWLIENEGNGRMSTTASDIHIAICGIEK
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEECCCCEEEEEECHHH
IVESFEDASILDTLLVPSATGAPITCYNNIITSPRKNGELDGPKEVHIILLDNNRSTILK
HHHHHCCHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHH
DAHFYRSLSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVISPQLFGMKNFGHMVNLC
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCHHHCHHHHHHHHHHH
SLCGRCSEVCPVKIPLAELIRDLRSEKVGQGRKNLKNNDGSLRDKGEEYAMKQFANAATN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
GDAWRELLNLPNKPLLMPLVKLFSGFIPGLKNWVAYRTFPTLNGNLHKKISHMKGVIYE
HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SHQEHTNIVHTKLNDKQLRTNLKSVMDTLKGNRKNLISSRYIDWEALREQGRAVKQKTL
CCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHHHHH
SQLDTLLERFEQNATKNGFIVHWARDSKETNEIIYNLMREKNITKILKGKSMASEETHLN
HHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
AFLKQKGINPIETDLGELIIQLIDEPPVHIVAPAIHKNRYQIGEIFQQKLGANLESEPEK
HHHHHCCCCHHHHHHHHHHHHHHCCCCCEEECCHHHCCCHHHHHHHHHHHCCCCCCCHHH
LNEIARVHLRKEFQEFKMGLSGVNFAIANEGAIWLIENEGNGRMSTTASDIHIAICGIEK
HHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEEEEEECCCCCEEECCCCEEEEEECHHH
IVESFEDASILDTLLVPSATGAPITCYNNIITSPRKNGELDGPKEVHIILLDNNRSTILK
HHHHHCCHHHHHHHHCCCCCCCCEEEHHHHHCCCCCCCCCCCCCEEEEEEEECCCCHHHH
DAHFYRSLSCIRCGTCLNHCPVYDKIGGHAYLSTYPGPIGEVISPQLFGMKNFGHMVNLC
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCHHHHCCCHHHCHHHHHHHHHHH
SLCGRCSEVCPVKIPLAELIRDLRSEKVGQGRKNLKNNDGSLRDKGEEYAMKQFANAATN
HHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCC
GDAWRELLNLPNKPLLMPLVKLFSGFIPGLKNWVAYRTFPTLNGNLHKKISHMKGVIYE
HHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHEECCCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]