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The map label for this gene is yhcC [H]

Identifier: 32265988

GI number: 32265988

Start: 474482

End: 475444

Strand: Direct

Name: yhcC [H]

Synonym: HH0489

Alternate gene names: 32265988

Gene position: 474482-475444 (Clockwise)

Preceding gene: 32265987

Following gene: 32265995

Centisome position: 26.37

GC content: 37.28

Gene sequence:

>963_bases
ATGCGTGTAATGTTAAGTATAGGGCGATATTTTAAAAGACGTTTTGGCACAAGGGTAAGAAAGATTCCTATTTCTTTACA
AGGATTTACTTGTCCCAATATCGATGGAAGCCTTGCCAAAGGCGGCTGTATCTATTGTGATAATGAAAGTTTTTCACCCA
GTCTCATTAAGCTTGATAAAATTTCTGAAGTCAAAATGAATTTTTCACTTACTCATAATCCCCTACTTCAAAAACAGCTC
AAGCAGCTAGAAGAGCAGTTCTATTGGCACTCTGAATTTCATCAAAGAAAATTTGGTGTGTGCAAATATATGATATATTT
TCAATCATACACAAACACTTATGCGCCTTATTCCACGCTCAAAGCCCTCTATGATAAAGCACTAAGTTTCCCAAATGTCG
TAGGTTTAAGCATAGGCACACGCATTGATTGCGTAAAAGATGAAGTGCTGGAACTTTTAGGCGAATATGTCAAAAAAGGC
AAAGAAATTTGGTTAGAATATGGAATCCAATCGGTGTATGATAACACTCTAACAATCACAAACCGCGCTCATAGTATTGC
AGGAGCTAAAGAGATGTTTGCAAAAACTCGTGAAAAAGGTGTGAAAGTCTGCGCACACCTTATTTATGGATTACCCGAAG
AAACCCCTCAAATGATGCTCTACTCGCTAGAATCTGTGTTAGAATGGGGAATTGATGGTATTAAAATTCACCCTTTATAT
GTTGTCAATGGCACGCGTCTTGCTAAACTTTATAAAGATGGGAAATATGAGCCAATCACAATGGAAAGCTTTAGTGATCT
TATTGTGAAATCTTTACAAAAAATCCCACCTGATGTAGTCGTGCAGAGAATCAGTGCAGGAGCACACGATGAATCTTTAC
TTGCTCCTAAATGGTGTTTTGATAAAAACATTCAAATGCGCTATCTCCGCGATAGGCTTAAAGAAGTAGGAATAGAATAT
TAG

Upstream 100 bases:

>100_bases
TTCTTTATGCAAAGCGTGTTTTGATGGACATTATATTGATGATTATACCACAGGTGCAGCAATCCCTGCCGCTTTAAAAT
CCTCTCATTAAAGATATATA

Downstream 100 bases:

>100_bases
AATCTTTTTTGCCCAATGTTTAAACCTCATCTCATTGCTCACAAAAGGAAGGAAGTCTCATCCAAAACCCGTCAATTCCT
CTTTCACTTTCTTTGCCATT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 320; Mature: 320

Protein sequence:

>320_residues
MRVMLSIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDKISEVKMNFSLTHNPLLQKQL
KQLEEQFYWHSEFHQRKFGVCKYMIYFQSYTNTYAPYSTLKALYDKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKG
KEIWLEYGIQSVYDNTLTITNRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLESVLEWGIDGIKIHPLY
VVNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCFDKNIQMRYLRDRLKEVGIEY

Sequences:

>Translated_320_residues
MRVMLSIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDKISEVKMNFSLTHNPLLQKQL
KQLEEQFYWHSEFHQRKFGVCKYMIYFQSYTNTYAPYSTLKALYDKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKG
KEIWLEYGIQSVYDNTLTITNRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLESVLEWGIDGIKIHPLY
VVNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCFDKNIQMRYLRDRLKEVGIEY
>Mature_320_residues
MRVMLSIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDKISEVKMNFSLTHNPLLQKQL
KQLEEQFYWHSEFHQRKFGVCKYMIYFQSYTNTYAPYSTLKALYDKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKG
KEIWLEYGIQSVYDNTLTITNRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLESVLEWGIDGIKIHPLY
VVNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCFDKNIQMRYLRDRLKEVGIEY

Specific function: Unknown

COG id: COG1242

COG function: function code R; Predicted Fe-S oxidoreductase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0486 [H]

Homologues:

Organism=Homo sapiens, GI23510283, Length=206, Percent_Identity=30.0970873786408, Blast_Score=84, Evalue=1e-16,
Organism=Escherichia coli, GI2367204, Length=312, Percent_Identity=38.1410256410256, Blast_Score=231, Evalue=5e-62,
Organism=Caenorhabditis elegans, GI133955098, Length=200, Percent_Identity=28.5, Blast_Score=75, Evalue=4e-14,
Organism=Saccharomyces cerevisiae, GI6325171, Length=204, Percent_Identity=27.9411764705882, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI19920684, Length=200, Percent_Identity=28.5, Blast_Score=78, Evalue=7e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005911
- InterPro:   IPR006638
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 36849; Mature: 36849

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMLSIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDK
CEEHHHHHHHHHHHHCCHHEECCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECC
ISEVKMNFSLTHNPLLQKQLKQLEEQFYWHSEFHQRKFGVCKYMIYFQSYTNTYAPYSTL
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KALYDKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKGKEIWLEYGIQSVYDNTLTIT
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLESVLEWGIDGIKIHPLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
VVNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCF
EECCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHC
DKNIQMRYLRDRLKEVGIEY
CCCCHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRVMLSIGRYFKRRFGTRVRKIPISLQGFTCPNIDGSLAKGGCIYCDNESFSPSLIKLDK
CEEHHHHHHHHHHHHCCHHEECCEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCEEECC
ISEVKMNFSLTHNPLLQKQLKQLEEQFYWHSEFHQRKFGVCKYMIYFQSYTNTYAPYSTL
HHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KALYDKALSFPNVVGLSIGTRIDCVKDEVLELLGEYVKKGKEIWLEYGIQSVYDNTLTIT
HHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
NRAHSIAGAKEMFAKTREKGVKVCAHLIYGLPEETPQMMLYSLESVLEWGIDGIKIHPLY
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEE
VVNGTRLAKLYKDGKYEPITMESFSDLIVKSLQKIPPDVVVQRISAGAHDESLLAPKWCF
EECCHHHHHHHHCCCCCCEEHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHC
DKNIQMRYLRDRLKEVGIEY
CCCCHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]