| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is parA
Identifier: 32265921
GI number: 32265921
Start: 407194
End: 407979
Strand: Direct
Name: parA
Synonym: HH0422
Alternate gene names: 32265921
Gene position: 407194-407979 (Clockwise)
Preceding gene: 32265920
Following gene: 32265922
Centisome position: 22.63
GC content: 35.11
Gene sequence:
>786_bases ATGAGTGAAATTATAACCATAGCAAACCAAAAAGGTGGCGTAGGCAAAACAACTACCACTGTGAATCTAGCAGCCTTTTT GGCTTCAGCAAATAAAAGTGTATTAATAATTGACTATGACCCACAGGCAAATGCGACCACAAGTTTTGGTATCCGCCGAA ACAAAATAGAATCTGATATGTATCACGTGCTCACAGGCTCAAAAAAACTTTCTCAAATCATACTTAAAACTGATATTCCA AATCTTGATATTGCACCTTCAAATATTGGTTTGGCAGGTATTGAAAAAGAATTTTATAATAAAAACAATATTAAGGGTCG AGAACTCCTTTTAAGTAAAAAAATTGAAGAAATAAAAAACCAATATGATTTTATTGTAATTGATTCTCCGCCTGCACTTG GCTCGCTCACAGTCAATGCTCTAGCTGCTGCAGATTCTGTAATTGTGCCAATTCAATGTGAGTTTTTTGCACTCGAGGGT TTAGCTCAACTGCTTAATACAATTAAACTTCTTAAAGATACTATTAACCCAAGATTAAGTATCAAAGGATTTTTGCCTAC TATGTATTCAGGACAGCATAACCTCTCAAGACAAGTGTTTGAAGAGCTTGCACAACATTTTAGCAGAGAACTTTTCAAAG ACAAAGATGAATTTATTATAGTCCCACGCAGTGTCAAACTTGCCGAATCTCCTAGTTTTGGTAAACCCATTATGCTTTAT GATACTCGCTCTAATGGAAGTATAGCTTATGAAAATCTTGCTCGTGTTATTTTGCAAGGAGCATAA
Upstream 100 bases:
>100_bases CAGAATAAACACATTTGTCTGAAAGACACAATACTCAATGAAGATGGCTCTTTGAGTATTGATGGACATAAAATTTATAG CTTACGATAAAGGGGAGACA
Downstream 100 bases:
>100_bases GAGAAATGGCTAAAAAAAAGTTGGCAATGGGCAGGGGACTTGGGGCGATACTTTCTGAAACTGCAGAAGCATATGAACAA AACCTTAGTGATAATTCTTC
Product: chromosome partitioning ATPase ParA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 261; Mature: 260
Protein sequence:
>261_residues MSEIITIANQKGGVGKTTTTVNLAAFLASANKSVLIIDYDPQANATTSFGIRRNKIESDMYHVLTGSKKLSQIILKTDIP NLDIAPSNIGLAGIEKEFYNKNNIKGRELLLSKKIEEIKNQYDFIVIDSPPALGSLTVNALAAADSVIVPIQCEFFALEG LAQLLNTIKLLKDTINPRLSIKGFLPTMYSGQHNLSRQVFEELAQHFSRELFKDKDEFIIVPRSVKLAESPSFGKPIMLY DTRSNGSIAYENLARVILQGA
Sequences:
>Translated_261_residues MSEIITIANQKGGVGKTTTTVNLAAFLASANKSVLIIDYDPQANATTSFGIRRNKIESDMYHVLTGSKKLSQIILKTDIP NLDIAPSNIGLAGIEKEFYNKNNIKGRELLLSKKIEEIKNQYDFIVIDSPPALGSLTVNALAAADSVIVPIQCEFFALEG LAQLLNTIKLLKDTINPRLSIKGFLPTMYSGQHNLSRQVFEELAQHFSRELFKDKDEFIIVPRSVKLAESPSFGKPIMLY DTRSNGSIAYENLARVILQGA >Mature_260_residues SEIITIANQKGGVGKTTTTVNLAAFLASANKSVLIIDYDPQANATTSFGIRRNKIESDMYHVLTGSKKLSQIILKTDIPN LDIAPSNIGLAGIEKEFYNKNNIKGRELLLSKKIEEIKNQYDFIVIDSPPALGSLTVNALAAADSVIVPIQCEFFALEGL AQLLNTIKLLKDTINPRLSIKGFLPTMYSGQHNLSRQVFEELAQHFSRELFKDKDEFIIVPRSVKLAESPSFGKPIMLYD TRSNGSIAYENLARVILQGA
Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the parA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 - InterPro: IPR000392 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 28775; Mature: 28643
Theoretical pI: Translated: 8.88; Mature: 8.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIITIANQKGGVGKTTTTVNLAAFLASANKSVLIIDYDPQANATTSFGIRRNKIESDM CCCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCEEHHHHHHHH YHVLTGSKKLSQIILKTDIPNLDIAPSNIGLAGIEKEFYNKNNIKGRELLLSKKIEEIKN HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHC QYDFIVIDSPPALGSLTVNALAAADSVIVPIQCEFFALEGLAQLLNTIKLLKDTINPRLS CCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEE IKGFLPTMYSGQHNLSRQVFEELAQHFSRELFKDKDEFIIVPRSVKLAESPSFGKPIMLY EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCEEEE DTRSNGSIAYENLARVILQGA EECCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SEIITIANQKGGVGKTTTTVNLAAFLASANKSVLIIDYDPQANATTSFGIRRNKIESDM CCEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEEEEECCCCCCCEECCEEHHHHHHHH YHVLTGSKKLSQIILKTDIPNLDIAPSNIGLAGIEKEFYNKNNIKGRELLLSKKIEEIKN HHHHCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHC QYDFIVIDSPPALGSLTVNALAAADSVIVPIQCEFFALEGLAQLLNTIKLLKDTINPRLS CCCEEEEECCCCCCHHHHHHHHCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCEE IKGFLPTMYSGQHNLSRQVFEELAQHFSRELFKDKDEFIIVPRSVKLAESPSFGKPIMLY EEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCEEECCCCCCCCCEEEE DTRSNGSIAYENLARVILQGA EECCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1552862; 7584024; 9384377; 8071208 [H]