| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is birA
Identifier: 32265920
GI number: 32265920
Start: 406464
End: 407183
Strand: Direct
Name: birA
Synonym: HH0421
Alternate gene names: 32265920
Gene position: 406464-407183 (Clockwise)
Preceding gene: 32265919
Following gene: 32265921
Centisome position: 22.59
GC content: 33.19
Gene sequence:
>720_bases ATGACTCATAATTCACCACAAGCTTTTTTTACAACTTCTTTTATCACTTTGCTCCAAGAACATATATACCATTTTGATAC ATTACCCTCTACCCAAACTTGGGCTGTTGAAAAAATTAAAGCAAAAACGCTTATAGCACCTTTTTGTATCCACGCTAAAA GACAAACACAAGGTATAGGAAGCCGAGGCAACCAATGGGAAAATGTGCCACGAGGGCTTATGTTTTCATTTGCACTACCA CTAGTCAGCTTACCGCAAGATTTAAAGATAGAATCAAGTTCCATATTTTTTGGTGTCATTTTACAACAATTTCTTGCTTC ACTTGGCTCAAAAGTGTGGCTCAAATATCCTAATGATTTATACATAAATGAGCACAAAATTGGCGGTATTCTTACGCAAA AAATACACGATAGTCTTGTATGCGGTATGGGTATAAACCTTTATCATTCTCCCGATGCTTCAAATAGCCAACACTACGCT ACTCTAGAAAAATCTATCAGTGCTAATATAGAACCTTTAAGCTTTTTGAGCAATTTTTTTCAAAGCTTTGAAAAATTTAT ATCTTGGAAGCAGATTTTTAGTATTTATAAGTTAGAATTTCACAAAAATAACTCTTATTTTTTTCACTTTCAGAATAAAC ACATTTGTCTGAAAGACACAATACTCAATGAAGATGGCTCTTTGAGTATTGATGGACATAAAATTTATAGCTTACGATAA
Upstream 100 bases:
>100_bases ATTGCAACAAGAGGGAAAAGAAAAGCTCAATGCCGCACTTTATTTACGTGGCAAAAGACTTAATGTAGGCGATATATTGT GCTAAAATAAGGTATTATCA
Downstream 100 bases:
>100_bases AGGGGAGACAATGAGTGAAATTATAACCATAGCAAACCAAAAAGGTGGCGTAGGCAAAACAACTACCACTGTGAATCTAG CAGCCTTTTTGGCTTCAGCA
Product: biotin--protein ligase
Products: AMP; diphosphate; [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Alternate protein names: Biotin/Acetyl-CoA-Carboxylase Ligase; Biotin-[Acetyl-CoA-Carboxylase] Synthetase; Biotin-Acetyl-CoA-Carboxylase Ligase; Biotin-[Acetyl-CoA-Carboxylase] Ligase; Biotin-(Acetyl-CoA-Carboxylase) Ligase
Number of amino acids: Translated: 239; Mature: 238
Protein sequence:
>239_residues MTHNSPQAFFTTSFITLLQEHIYHFDTLPSTQTWAVEKIKAKTLIAPFCIHAKRQTQGIGSRGNQWENVPRGLMFSFALP LVSLPQDLKIESSSIFFGVILQQFLASLGSKVWLKYPNDLYINEHKIGGILTQKIHDSLVCGMGINLYHSPDASNSQHYA TLEKSISANIEPLSFLSNFFQSFEKFISWKQIFSIYKLEFHKNNSYFFHFQNKHICLKDTILNEDGSLSIDGHKIYSLR
Sequences:
>Translated_239_residues MTHNSPQAFFTTSFITLLQEHIYHFDTLPSTQTWAVEKIKAKTLIAPFCIHAKRQTQGIGSRGNQWENVPRGLMFSFALP LVSLPQDLKIESSSIFFGVILQQFLASLGSKVWLKYPNDLYINEHKIGGILTQKIHDSLVCGMGINLYHSPDASNSQHYA TLEKSISANIEPLSFLSNFFQSFEKFISWKQIFSIYKLEFHKNNSYFFHFQNKHICLKDTILNEDGSLSIDGHKIYSLR >Mature_238_residues THNSPQAFFTTSFITLLQEHIYHFDTLPSTQTWAVEKIKAKTLIAPFCIHAKRQTQGIGSRGNQWENVPRGLMFSFALPL VSLPQDLKIESSSIFFGVILQQFLASLGSKVWLKYPNDLYINEHKIGGILTQKIHDSLVCGMGINLYHSPDASNSQHYAT LEKSISANIEPLSFLSNFFQSFEKFISWKQIFSIYKLEFHKNNSYFFHFQNKHICLKDTILNEDGSLSIDGHKIYSLR
Specific function: Bira Acts Both As A Biotin-Operon Repressor And As The Enzyme That Synthesizes The Corepressor, Acetyl-CoA:Carbon- Dioxide Ligase. This Protein Also Activates Biotin To Form Biotinyl-5'-Adenylate And Transfers The Biotin Moiety To Biotin-Accepting Protei
COG id: COG0340
COG function: function code H; Biotin-(acetyl-CoA carboxylase) ligase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 6.3.4.15
Molecular weight: Translated: 27427; Mature: 27296
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHNSPQAFFTTSFITLLQEHIYHFDTLPSTQTWAVEKIKAKTLIAPFCIHAKRQTQGIG CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRGNQWENVPRGLMFSFALPLVSLPQDLKIESSSIFFGVILQQFLASLGSKVWLKYPNDL CCCCCCHHCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCEEEEECCCEE YINEHKIGGILTQKIHDSLVCGMGINLYHSPDASNSQHYATLEKSISANIEPLSFLSNFF EEECCHHCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH QSFEKFISWKQIFSIYKLEFHKNNSYFFHFQNKHICLKDTILNEDGSLSIDGHKIYSLR HHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCEEEEEEEEECCCCCEEECCEEEEEEC >Mature Secondary Structure THNSPQAFFTTSFITLLQEHIYHFDTLPSTQTWAVEKIKAKTLIAPFCIHAKRQTQGIG CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC SRGNQWENVPRGLMFSFALPLVSLPQDLKIESSSIFFGVILQQFLASLGSKVWLKYPNDL CCCCCCHHCCHHHHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHHCCCEEEEECCCEE YINEHKIGGILTQKIHDSLVCGMGINLYHSPDASNSQHYATLEKSISANIEPLSFLSNFF EEECCHHCHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH QSFEKFISWKQIFSIYKLEFHKNNSYFFHFQNKHICLKDTILNEDGSLSIDGHKIYSLR HHHHHHHHHHHHHHHHHEEEECCCCEEEEECCCEEEEEEEEECCCCCEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; biotin; apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
Specific reaction: ATP + biotin + apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] = AMP + diphosphate + [acetyl-CoA:carbon-dioxide ligase (ADP-forming)]
General reaction: Amination; Carboxylic acid formation (carboxamide formation [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA