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The map label for this gene is 32265750

Identifier: 32265750

GI number: 32265750

Start: 242444

End: 243232

Strand: Direct

Name: 32265750

Synonym: HH0251

Alternate gene names: NA

Gene position: 242444-243232 (Clockwise)

Preceding gene: 32265749

Following gene: 32265751

Centisome position: 13.48

GC content: 35.11

Gene sequence:

>789_bases
ATGAACACAGAGCAAGAACTTTCCCTGCTACTTGAAACAAATTTTGCAAACCATTGCAACAATATGCAAAACAATAAGAT
TTTACACTTGACCTTGCCATTACTTTTGTTTGCTACACGACTTTCCAAAACAGGCATACTTGATGATAGCTATATCACAA
ATACAGAAGAAACTTTTGCTAATGAAATCCTCTCTATCGGAAGCAATCTCAATGCTTTGCGTTGTTATGAAGATAAGGAT
TTAATCAAACTCCGTTACTGCTTGTGTGTGTTTATTGATGAAATGCTCTTACATAATGAAAGCTTTATCAATAGCCACTT
TGCAAAACATACACTTACTATACGTCTTTTTGATGAAATGCTAGGTGGAGATAAGTTTTATGGTATTGCCAATCAATGGC
TTCTTACCCCAAGCAAACACAAAGATATGCTAGAATTTATCTATACATGCCTTATTTTGGGCTATCAAGGCAAATATGCC
TCCGACACTCAAGGCAAACAAAAAATTAATCATCTATGCTGCAATATAGCAAATTCTCTTGCTCCTGCTATGGGAAGTAG
CGAAGGAAAAGCTTTTGAATTAGCCCTCAATCATCAAGAGCAAACGCGTATTCTAAAACTTTTGCATAAAAAATACTTGC
GACCATTTTGGCTTATGGCTATCATTTGCTCCATCGTTGCATTATTCTTTCTTTTCTCATTTTTAAAGCTAGAATCTCAA
AAAGCCATTACACAAGATACCCTTAAACAAAATTTGCAACACTTCAAGGTATCTCCACATGAGGATTAA

Upstream 100 bases:

>100_bases
CGCATTTTGCTAAGCAAAATGTTATCAGCCTTTATATGACAAATAATATCACAAAGCCCGACATTAAGCTTTGGGCATTA
TTTAACTAAAGAGAAATGCT

Downstream 100 bases:

>100_bases
GGAAATGTTTGGCAAGATATTTAATTATCTCAAATCAAAAACTTTTCTCTATATTTTACTTATATGTTTTGCGTTGCTTT
TAAGTGTACTTTTTTACATA

Product: hypothetical protein

Products: NA

Alternate protein names: Type IV / VI Secretion System Protein DotU Family; Type IV/VI Secretion System Protein; OmpA/MotB Domain-Containing Protein; Aspartyl/Glutamyl-TRNA(Asn/Gln) Amidotransferase Subunit B; OmpA Family Protein; Type IV / VI Secretion System Transmembrane Protein; Type VI Secretion System VasF

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MNTEQELSLLLETNFANHCNNMQNNKILHLTLPLLLFATRLSKTGILDDSYITNTEETFANEILSIGSNLNALRCYEDKD
LIKLRYCLCVFIDEMLLHNESFINSHFAKHTLTIRLFDEMLGGDKFYGIANQWLLTPSKHKDMLEFIYTCLILGYQGKYA
SDTQGKQKINHLCCNIANSLAPAMGSSEGKAFELALNHQEQTRILKLLHKKYLRPFWLMAIICSIVALFFLFSFLKLESQ
KAITQDTLKQNLQHFKVSPHED

Sequences:

>Translated_262_residues
MNTEQELSLLLETNFANHCNNMQNNKILHLTLPLLLFATRLSKTGILDDSYITNTEETFANEILSIGSNLNALRCYEDKD
LIKLRYCLCVFIDEMLLHNESFINSHFAKHTLTIRLFDEMLGGDKFYGIANQWLLTPSKHKDMLEFIYTCLILGYQGKYA
SDTQGKQKINHLCCNIANSLAPAMGSSEGKAFELALNHQEQTRILKLLHKKYLRPFWLMAIICSIVALFFLFSFLKLESQ
KAITQDTLKQNLQHFKVSPHED
>Mature_262_residues
MNTEQELSLLLETNFANHCNNMQNNKILHLTLPLLLFATRLSKTGILDDSYITNTEETFANEILSIGSNLNALRCYEDKD
LIKLRYCLCVFIDEMLLHNESFINSHFAKHTLTIRLFDEMLGGDKFYGIANQWLLTPSKHKDMLEFIYTCLILGYQGKYA
SDTQGKQKINHLCCNIANSLAPAMGSSEGKAFELALNHQEQTRILKLLHKKYLRPFWLMAIICSIVALFFLFSFLKLESQ
KAITQDTLKQNLQHFKVSPHED

Specific function: Unknown

COG id: COG3455

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30159; Mature: 30159

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTEQELSLLLETNFANHCNNMQNNKILHLTLPLLLFATRLSKTGILDDSYITNTEETFA
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
NEILSIGSNLNALRCYEDKDLIKLRYCLCVFIDEMLLHNESFINSHFAKHTLTIRLFDEM
HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGDKFYGIANQWLLTPSKHKDMLEFIYTCLILGYQGKYASDTQGKQKINHLCCNIANSL
HCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
APAMGSSEGKAFELALNHQEQTRILKLLHKKYLRPFWLMAIICSIVALFFLFSFLKLESQ
HHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAITQDTLKQNLQHFKVSPHED
HHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNTEQELSLLLETNFANHCNNMQNNKILHLTLPLLLFATRLSKTGILDDSYITNTEETFA
CCCHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHH
NEILSIGSNLNALRCYEDKDLIKLRYCLCVFIDEMLLHNESFINSHFAKHTLTIRLFDEM
HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGGDKFYGIANQWLLTPSKHKDMLEFIYTCLILGYQGKYASDTQGKQKINHLCCNIANSL
HCCCCEEECCCCEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
APAMGSSEGKAFELALNHQEQTRILKLLHKKYLRPFWLMAIICSIVALFFLFSFLKLESQ
HHCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KAITQDTLKQNLQHFKVSPHED
HHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA