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The map label for this gene is napH

Identifier: 32265659

GI number: 32265659

Start: 155087

End: 156016

Strand: Direct

Name: napH

Synonym: HH0160

Alternate gene names: 32265659

Gene position: 155087-156016 (Clockwise)

Preceding gene: 32265658

Following gene: 32265660

Centisome position: 8.62

GC content: 37.2

Gene sequence:

>930_bases
ATGAAGTTTGCAAAAATAAAATATCTGCTTCTTAGGCGTTTATCTCAATTTGTAATTCTTGCACTTTTTATAATGGGGAA
TTATTCTATTGCGACACTTAAAAATGTGCAAAACAAAGAAGAATTGGGTGTTTTTGGTGGCAATATAGAATCTCTAATAG
GAGATTCTAGCTCTGTGGTGGCAAAGCAACCAAGCATACTAAGCTCTATCGTGCAAGGAAATTTAAGTCATTCAAGCTGG
TTTGGTGGCGCTTTTAATCTCACAGACCCTTTAAGCGTAATGCAAATTTTTCTTGCAGGTGGTGGATTAGCATTTGATGT
ATTGCTCGGAACTTTGCTTGTAGTGCTGATTTATGGCATATTTTTAGGGAGAGCTTATTGTGCTTTTGTTTGTCCTATTA
ATCTTATAACAGATTTTGCAAACTTCTTACGCGCAAAGCTAGGATTAAATTATGCTCAACGTAAGCTCTTTCTTTCGCGT
TCTACACGATTTGTAATCTTAGGGCTAGGCTTAAGTTTAAGTGCAATATTTGGTGTAGCTGCCTTTGAACTTATTAGCCC
TATCTCTATGGTGCATCGTGGTGTAGTTTTTGGTATGGGTTTTGGCATTTTTGCCATAGTGGCTGTGTTTTGCTTTGATT
TATTTGTGCTTAAAAATGGTTTTTGTGGGCATATTTGTCCGCTTGGGGCAATGTATTCACTCATTGGGAAATTTGCACTT
TTACGCGTTCATCATACACTTTCACATTGCACAAAATGTATGAAATGTGTGCAAATTTGCCCTGAGCCTGAAGTCCTAAA
ACCTATTGGCAAACAAGGAGGCGCATTAAAAACAATGACTTGTTTGCGCTGTGGGAGATGTATTGAGGTGTGCGATGATA
ACGCACTGAATTTTAGTATTTTAAATTTTACACACAAGGAGAAAAGATGA

Upstream 100 bases:

>100_bases
ACAGACTTTTTGAACTCAAAGAACAAAAAAACATCAAGTCTAAAAAACCTAGCCATAGCGATAGTTTAGAGTATCTCAAC
AATTCACTTGGAGAGATATA

Downstream 100 bases:

>100_bases
AAAAATACGCTCAAAGTTTAATAATTGGGTTACTTGGATTGGCATTTTTCGCGTGTTCAGATTCTACGGAATCTAAAAGT
GATAATGTGTCTAAAGAGAT

Product: quinol dehydrogenase membrane component

Products: reduced acceptor; NO3- [C]

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 309

Protein sequence:

>309_residues
MKFAKIKYLLLRRLSQFVILALFIMGNYSIATLKNVQNKEELGVFGGNIESLIGDSSSVVAKQPSILSSIVQGNLSHSSW
FGGAFNLTDPLSVMQIFLAGGGLAFDVLLGTLLVVLIYGIFLGRAYCAFVCPINLITDFANFLRAKLGLNYAQRKLFLSR
STRFVILGLGLSLSAIFGVAAFELISPISMVHRGVVFGMGFGIFAIVAVFCFDLFVLKNGFCGHICPLGAMYSLIGKFAL
LRVHHTLSHCTKCMKCVQICPEPEVLKPIGKQGGALKTMTCLRCGRCIEVCDDNALNFSILNFTHKEKR

Sequences:

>Translated_309_residues
MKFAKIKYLLLRRLSQFVILALFIMGNYSIATLKNVQNKEELGVFGGNIESLIGDSSSVVAKQPSILSSIVQGNLSHSSW
FGGAFNLTDPLSVMQIFLAGGGLAFDVLLGTLLVVLIYGIFLGRAYCAFVCPINLITDFANFLRAKLGLNYAQRKLFLSR
STRFVILGLGLSLSAIFGVAAFELISPISMVHRGVVFGMGFGIFAIVAVFCFDLFVLKNGFCGHICPLGAMYSLIGKFAL
LRVHHTLSHCTKCMKCVQICPEPEVLKPIGKQGGALKTMTCLRCGRCIEVCDDNALNFSILNFTHKEKR
>Mature_309_residues
MKFAKIKYLLLRRLSQFVILALFIMGNYSIATLKNVQNKEELGVFGGNIESLIGDSSSVVAKQPSILSSIVQGNLSHSSW
FGGAFNLTDPLSVMQIFLAGGGLAFDVLLGTLLVVLIYGIFLGRAYCAFVCPINLITDFANFLRAKLGLNYAQRKLFLSR
STRFVILGLGLSLSAIFGVAAFELISPISMVHRGVVFGMGFGIFAIVAVFCFDLFVLKNGFCGHICPLGAMYSLIGKFAL
LRVHHTLSHCTKCMKCVQICPEPEVLKPIGKQGGALKTMTCLRCGRCIEVCDDNALNFSILNFTHKEKR

Specific function: Involved in electron transfer (Potential) [H]

COG id: COG0348

COG function: function code C; Polyferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788532, Length=297, Percent_Identity=33.3333333333333, Blast_Score=158, Evalue=3e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011886 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33757; Mature: 33757

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFAKIKYLLLRRLSQFVILALFIMGNYSIATLKNVQNKEELGVFGGNIESLIGDSSSVV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCHH
AKQPSILSSIVQGNLSHSSWFGGAFNLTDPLSVMQIFLAGGGLAFDVLLGTLLVVLIYGI
HCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLGRAYCAFVCPINLITDFANFLRAKLGLNYAQRKLFLSRSTRFVILGLGLSLSAIFGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AFELISPISMVHRGVVFGMGFGIFAIVAVFCFDLFVLKNGFCGHICPLGAMYSLIGKFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LRVHHTLSHCTKCMKCVQICPEPEVLKPIGKQGGALKTMTCLRCGRCIEVCDDNALNFSI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
LNFTHKEKR
EECCCCCCC
>Mature Secondary Structure
MKFAKIKYLLLRRLSQFVILALFIMGNYSIATLKNVQNKEELGVFGGNIESLIGDSSSVV
CCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHCCCCCCHHHHHCCCCCHH
AKQPSILSSIVQGNLSHSSWFGGAFNLTDPLSVMQIFLAGGGLAFDVLLGTLLVVLIYGI
HCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
FLGRAYCAFVCPINLITDFANFLRAKLGLNYAQRKLFLSRSTRFVILGLGLSLSAIFGVA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH
AFELISPISMVHRGVVFGMGFGIFAIVAVFCFDLFVLKNGFCGHICPLGAMYSLIGKFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LRVHHTLSHCTKCMKCVQICPEPEVLKPIGKQGGALKTMTCLRCGRCIEVCDDNALNFSI
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCEEEE
LNFTHKEKR
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acceptor; nitrite [C]

Specific reaction: Acceptor + nitrite = reduced acceptor + NO3- [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8021187 [H]