Definition Helicobacter hepaticus ATCC 51449 chromosome, complete genome.
Accession NC_004917
Length 1,799,146

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The map label for this gene is 32265519

Identifier: 32265519

GI number: 32265519

Start: 20820

End: 22151

Strand: Direct

Name: 32265519

Synonym: HH0020

Alternate gene names: NA

Gene position: 20820-22151 (Clockwise)

Preceding gene: 32265518

Following gene: 32265520

Centisome position: 1.16

GC content: 30.56

Gene sequence:

>1332_bases
ATGCTAGAAAACGAGATTCGTATGGCAATTTTGCATTTTTATAATCAATGTGGTTTGGGGGCTTTTGTGCATTATGATAA
AAATCAACTTCAGGTTATAACACACATCAAAAATCACACCCATAATCTTTATGTGCAGCGCATTTGCGATTTTTTAAAAA
AACATAAATTCACGCTTTATAAACAAGAACCTTCCAAAGAAGATTTTGAGGAACTTTTTCATTTTGTAGATACAACACTT
GATTTAAATACCCAAAGCACCAAACGCGAAATGATAAAAATTGCTTTGCGCAATGTATTTGGCATACAAGCGCGCGATGC
TTTATTTTTTAAAGACGGCAATATTAAGCTTTTTAAATTTGATTATGAAATAGTAAAAATCAATAATGAAATCCGCCAAA
TTAATCGGAACTCCCATATAAATGTCCTAAGTAATGAAGATAGAATGGTGCTTGATAATGCGCTCTCTATGACAAATGTC
CAATCTCTTATTATCCAAAATACGCTTCTAATACTGCAAAAAGATATTGACTTAAAACAGATTGACAATCTAGGCTTTAA
CAAAAGATTTAAGTTTTTTGCTATTCAAAAATTGCGTGTATATATTGAAAGTTTGCAATTACATCATATAGATTCTTTAG
CAAAGAGTATTTATTGTATGGATATAGCCCAACAATATGCGTGGGTTATGTTTGAAATTGTAGCAAAAGAACTCCTAGAG
CTATGTGCGAAAGATAATGTGAATGCCATTGCATTTATTGAATTTTATAATGGAGGCTCTATTGAATTAAGGGGCAAGAT
TTTCAAAAAGCCTCTTATTACTGATAATAATGGTAATCCTTGGACTATACCGCTTATTAAGGAATGCTTAAAAAATAAAA
AAGCCATAGAGTTTGATATATCTCAAATGCAAAAACGTTTAGATGATTTTGAAGAGAAAATCCATAGTATCAACAACCAA
ATACAACAAAATGATACTGAAGAAAAAGATACCCTTACAAAAGAATCTTCCTATCAAGAACTTTTAGAATCTAAAAACAA
AGAATTGCGTATGCTTGTAGATAAAAAAGCTTCAAAAGTATATATAGAAGCTATTACAAATGAAATTAACACGCTTATAC
TTAATAAATCTAATATGCTTACATACATAGAAAATACACAAAAAAATCTCGCTGCTTTAGGCAAAGAACAAATAAAACTT
CTTGAAATGCAAGAGAGACTAAGAGAGCAAATTAGCTATGCGCTTAAAAAGAATAGAGAATATTTTGTTCAATATGATTT
ACTCTCACGTGCCCTTGCTGATGCCATAGCAAATGCAAAAGAGCTTATATGA

Upstream 100 bases:

>100_bases
TCTCTATATTTTACAAGAGAGCTTTGATACTCATACGTGCATTGCAGATGCCAAAACACAAAGCCAAAAACATCTTTTTA
CACTAATACAGGAAAATCCA

Downstream 100 bases:

>100_bases
AAAATACCATTACCCACCTTATTGATAAAATTTCCTTCCAAGCACAAACAACCATTTTAGTATGGATTATTGTCATCGGA
TTTACACTTATAGCAAGTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 443; Mature: 443

Protein sequence:

>443_residues
MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL
DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV
QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE
LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ
IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL
LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI

Sequences:

>Translated_443_residues
MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL
DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV
QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE
LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ
IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL
LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI
>Mature_443_residues
MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLYKQEPSKEDFEELFHFVDTTL
DLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKFDYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNV
QSLIIQNTLLILQKDIDLKQIDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE
LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDISQMQKRLDDFEEKIHSINNQ
IQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKVYIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKL
LEMQERLREQISYALKKNREYFVQYDLLSRALADAIANAKELI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52064; Mature: 52064

Theoretical pI: Translated: 7.93; Mature: 7.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLY
CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEE
KQEPSKEDFEELFHFVDTTLDLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKF
ECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE
DYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNVQSLIIQNTLLILQKDIDLKQ
EEEEEEECHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDI
HHHCCCCCEEEEEEEECCCCEEEECHHHCCCCEECCCCCEEEEHHHHHHHCCCCEEEECH
SQMQKRLDDFEEKIHSINNQIQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
YIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKLLEMQERLREQISYALKKNRE
HHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YFVQYDLLSRALADAIANAKELI
HEEEHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLENEIRMAILHFYNQCGLGAFVHYDKNQLQVITHIKNHTHNLYVQRICDFLKKHKFTLY
CCCHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEE
KQEPSKEDFEELFHFVDTTLDLNTQSTKREMIKIALRNVFGIQARDALFFKDGNIKLFKF
ECCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEE
DYEIVKINNEIRQINRNSHINVLSNEDRMVLDNALSMTNVQSLIIQNTLLILQKDIDLKQ
EEEEEEECHHHHHCCCCCCEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
IDNLGFNKRFKFFAIQKLRVYIESLQLHHIDSLAKSIYCMDIAQQYAWVMFEIVAKELLE
HHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCAKDNVNAIAFIEFYNGGSIELRGKIFKKPLITDNNGNPWTIPLIKECLKNKKAIEFDI
HHHCCCCCEEEEEEEECCCCEEEECHHHCCCCEECCCCCEEEEHHHHHHHCCCCEEEECH
SQMQKRLDDFEEKIHSINNQIQQNDTEEKDTLTKESSYQELLESKNKELRMLVDKKASKV
HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCHHH
YIEAITNEINTLILNKSNMLTYIENTQKNLAALGKEQIKLLEMQERLREQISYALKKNRE
HHHHHHHHHHEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
YFVQYDLLSRALADAIANAKELI
HEEEHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA