| Definition | Helicobacter hepaticus ATCC 51449 chromosome, complete genome. |
|---|---|
| Accession | NC_004917 |
| Length | 1,799,146 |
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The map label for this gene is zraS [H]
Identifier: 32265520
GI number: 32265520
Start: 22148
End: 23623
Strand: Direct
Name: zraS [H]
Synonym: HH0021
Alternate gene names: 32265520
Gene position: 22148-23623 (Clockwise)
Preceding gene: 32265519
Following gene: 32265521
Centisome position: 1.23
GC content: 31.98
Gene sequence:
>1476_bases ATGAAAAATACCATTACCCACCTTATTGATAAAATTTCCTTCCAAGCACAAACAACCATTTTAGTATGGATTATTGTCAT CGGATTTACACTTATAGCAAGTGTGGGCTTACTTGCTCTTATGGGGATAAAGAGTGAATTTGACATTAACTCATCACAAA GTCATAATATGTATACACTCACCTTATTAAATAAAGCATATGATATACACAAAAACGACCAGATACTCCTGCAACTCCTT GAAATATGGGAACAATATAAAACTTATAATCTCCCAAAAGATCAAAATTCTACTATTAGTCATTTGCGCGAGTGGTATGC TAAGACTTTTAAAATGCACTATTATCAACAGATTCAAAGATTACTTTCTAAAGAAAATGCTCTTATAGAATCTATTGATA AAGCTTTTATTAATGATGGAGAGGATATTTCCTCGCTACTTGAAGAACAATTTCTCATTTCTTTTGATATTGCTTTTTAT GGCAAAAAAATCACGGATTCTCTTTATAAAAATACCTTTATTGTCCTCGCAATCTTTATGCTTATTATCATCGCAACAAT CATTATTCTTGCCTTTTCTATCAGACAATCTATCAATACCAATCATTTACTTTTAGAGCAACTCGTGCAATCAAAAACCA AAGAACTCCAATCTCTTAATGTCAATCTGCAAAAATCAATAGAATATGAAGTTGAGCAAAATCGTAAAAAAGACTTGATT ATGTATCAACAAGCTAGGCTTGCTTCTATGGGAGAAATGATACAAAATATTGCCCATCAATGGCGCCAACCACTTAATTC TCTTATGATACTTATCCAAAGCTTTAAAAGTAGAGCAATGCAAAAAAAACTTGATAATGAATTTATAAACCAACAAACAC AATATGGTATGAAAATTGCCACAGAAATGTCAAATACGATTGAAAATTTTCGTAATTTCTTTCACCCAGAAACAAATAAA GAATTTTTTGAGCTCTCACAAAGCATTCGGAATTCTATTGAGCTGCTTAAAGCTCAATTTCAAGAGAATCTTATTCGTAT TGAAGTAGATGTAAGCCCACAAGCACAAGATTTAAATATGCTTGGTTACCAAAATTCCTTTACTCAAGTGATTTTAATTC TCATCAATAACGCCATTGACGCACTCAAGCTCAAAAGTCAAAATGATAAATCGTTTGAGAATCCACTCATAGAAATTTCA TTAGATAAGCTAGGATATAATATTATTCTTTGTGTGAAAGATAATGCGGGAGGCATTGATTTGGAAGATAAATCAAAAGT TTTTGAACCATATTTCACCACTAAACATAAATCGGTTGGAACAGGCGTGGGACTTTATATGGCAAAACAAATCATTGAAC GCCAACTCAATGGCACAATAAGCGTATCTAATACACAATGGGGTAAGCAGAACCAATATTTTGGAGCAGAATTTACCATT CACATACCAATACAAAAGGATAATTATGAATCTTGA
Upstream 100 bases:
>100_bases AAATTAGCTATGCGCTTAAAAAGAATAGAGAATATTTTGTTCAATATGATTTACTCTCACGTGCCCTTGCTGATGCCATA GCAAATGCAAAAGAGCTTAT
Downstream 100 bases:
>100_bases TGCACTAAGCAAACTCACTATTTTGTATGCCGAGGATGATACCGACACAGCCAATCTTACGAATATGGTGCTTGGAGATT ATGTAGGACGCCTACTTATT
Product: two-component sensor histidine kinase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 491; Mature: 491
Protein sequence:
>491_residues MKNTITHLIDKISFQAQTTILVWIIVIGFTLIASVGLLALMGIKSEFDINSSQSHNMYTLTLLNKAYDIHKNDQILLQLL EIWEQYKTYNLPKDQNSTISHLREWYAKTFKMHYYQQIQRLLSKENALIESIDKAFINDGEDISSLLEEQFLISFDIAFY GKKITDSLYKNTFIVLAIFMLIIIATIIILAFSIRQSINTNHLLLEQLVQSKTKELQSLNVNLQKSIEYEVEQNRKKDLI MYQQARLASMGEMIQNIAHQWRQPLNSLMILIQSFKSRAMQKKLDNEFINQQTQYGMKIATEMSNTIENFRNFFHPETNK EFFELSQSIRNSIELLKAQFQENLIRIEVDVSPQAQDLNMLGYQNSFTQVILILINNAIDALKLKSQNDKSFENPLIEIS LDKLGYNIILCVKDNAGGIDLEDKSKVFEPYFTTKHKSVGTGVGLYMAKQIIERQLNGTISVSNTQWGKQNQYFGAEFTI HIPIQKDNYES
Sequences:
>Translated_491_residues MKNTITHLIDKISFQAQTTILVWIIVIGFTLIASVGLLALMGIKSEFDINSSQSHNMYTLTLLNKAYDIHKNDQILLQLL EIWEQYKTYNLPKDQNSTISHLREWYAKTFKMHYYQQIQRLLSKENALIESIDKAFINDGEDISSLLEEQFLISFDIAFY GKKITDSLYKNTFIVLAIFMLIIIATIIILAFSIRQSINTNHLLLEQLVQSKTKELQSLNVNLQKSIEYEVEQNRKKDLI MYQQARLASMGEMIQNIAHQWRQPLNSLMILIQSFKSRAMQKKLDNEFINQQTQYGMKIATEMSNTIENFRNFFHPETNK EFFELSQSIRNSIELLKAQFQENLIRIEVDVSPQAQDLNMLGYQNSFTQVILILINNAIDALKLKSQNDKSFENPLIEIS LDKLGYNIILCVKDNAGGIDLEDKSKVFEPYFTTKHKSVGTGVGLYMAKQIIERQLNGTISVSNTQWGKQNQYFGAEFTI HIPIQKDNYES >Mature_491_residues MKNTITHLIDKISFQAQTTILVWIIVIGFTLIASVGLLALMGIKSEFDINSSQSHNMYTLTLLNKAYDIHKNDQILLQLL EIWEQYKTYNLPKDQNSTISHLREWYAKTFKMHYYQQIQRLLSKENALIESIDKAFINDGEDISSLLEEQFLISFDIAFY GKKITDSLYKNTFIVLAIFMLIIIATIIILAFSIRQSINTNHLLLEQLVQSKTKELQSLNVNLQKSIEYEVEQNRKKDLI MYQQARLASMGEMIQNIAHQWRQPLNSLMILIQSFKSRAMQKKLDNEFINQQTQYGMKIATEMSNTIENFRNFFHPETNK EFFELSQSIRNSIELLKAQFQENLIRIEVDVSPQAQDLNMLGYQNSFTQVILILINNAIDALKLKSQNDKSFENPLIEIS LDKLGYNIILCVKDNAGGIDLEDKSKVFEPYFTTKHKSVGTGVGLYMAKQIIERQLNGTISVSNTQWGKQNQYFGAEFTI HIPIQKDNYES
Specific function: Member of the two-component regulatory system zraS/zraR. May function as a membrane-associated protein kinase that phosphorylates zraR in response to high concentrations of zinc or lead in the medium [H]
COG id: COG0642
COG function: function code T; Signal transduction histidine kinase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
Organism=Escherichia coli, GI1790436, Length=248, Percent_Identity=27.8225806451613, Blast_Score=75, Evalue=1e-14, Organism=Escherichia coli, GI1788549, Length=252, Percent_Identity=25, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 56868; Mature: 56868
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNTITHLIDKISFQAQTTILVWIIVIGFTLIASVGLLALMGIKSEFDINSSQSHNMYTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE TLLNKAYDIHKNDQILLQLLEIWEQYKTYNLPKDQNSTISHLREWYAKTFKMHYYQQIQR EEEHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSKENALIESIDKAFINDGEDISSLLEEQFLISFDIAFYGKKITDSLYKNTFIVLAIFM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHCHHHHHHHHHHHHHHHHHHH LIIIATIIILAFSIRQSINTNHLLLEQLVQSKTKELQSLNVNLQKSIEYEVEQNRKKDLI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH MYQQARLASMGEMIQNIAHQWRQPLNSLMILIQSFKSRAMQKKLDNEFINQQTQYGMKIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEMSNTIENFRNFFHPETNKEFFELSQSIRNSIELLKAQFQENLIRIEVDVSPQAQDLNM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHCCHH LGYQNSFTQVILILINNAIDALKLKSQNDKSFENPLIEISLDKLGYNIILCVKDNAGGID HCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC LEDKSKVFEPYFTTKHKSVGTGVGLYMAKQIIERQLNGTISVSNTQWGKQNQYFGAEFTI CCCCHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEE HIPIQKDNYES EEEEECCCCCC >Mature Secondary Structure MKNTITHLIDKISFQAQTTILVWIIVIGFTLIASVGLLALMGIKSEFDINSSQSHNMYTL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEE TLLNKAYDIHKNDQILLQLLEIWEQYKTYNLPKDQNSTISHLREWYAKTFKMHYYQQIQR EEEHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLSKENALIESIDKAFINDGEDISSLLEEQFLISFDIAFYGKKITDSLYKNTFIVLAIFM HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHEEHHHHHCHHHHHHHHHHHHHHHHHHH LIIIATIIILAFSIRQSINTNHLLLEQLVQSKTKELQSLNVNLQKSIEYEVEQNRKKDLI HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHH MYQQARLASMGEMIQNIAHQWRQPLNSLMILIQSFKSRAMQKKLDNEFINQQTQYGMKIA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TEMSNTIENFRNFFHPETNKEFFELSQSIRNSIELLKAQFQENLIRIEVDVSPQAQDLNM HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCHHCCHH LGYQNSFTQVILILINNAIDALKLKSQNDKSFENPLIEISLDKLGYNIILCVKDNAGGID HCCCCHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEEEECCCCCCC LEDKSKVFEPYFTTKHKSVGTGVGLYMAKQIIERQLNGTISVSNTQWGKQNQYFGAEFTI CCCCHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEE HIPIQKDNYES EEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]