| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is fhuF
Identifier: 30065608
GI number: 30065608
Start: 4563888
End: 4564676
Strand: Reverse
Name: fhuF
Synonym: S4670
Alternate gene names: 30065608
Gene position: 4564676-4563888 (Counterclockwise)
Preceding gene: 30065609
Following gene: 229089129
Centisome position: 99.25
GC content: 52.85
Gene sequence:
>789_bases ATGGCCTATCGTTCCGCACCGCTCTATGAAGATGTCATCTGGCGAACGCATCTCCAGCCGCAGGATGCTGGGCTTGCACA AGCCGTACGGGCGATGATCGCCAAACATCGTGAACATTTGCTGGAGTTTATCCGCCTGGATGAACCCGCTCCGCTTAACG CCATGACGCTGGCGCAATGGTCATCACCGAATGCGCTAAGTTCTCTACTGGCGGTCTATTCCGATCATATCTATCGCAAC CAACCAACGATGATCCGCGAGAACAAACCGCTGATCTCACTATGGGCACAATGGTATATCGGCCTGATGGTGCCACCATT AATGCTGGCGCTACTGACGCAGGAAAAAGCATTAGATGTGTCGCCGGAACATTTCCATGCTGAGTTTCACGAAACCGGAC GCGTCGCCTGTTTCTGGGTCGATGTGTGTGAAGATAAAAACGCAACACCACATTCGCCGCAGCAGCGAATGGAAACGTTA ATCAGCCAGGCGCTGGTTCCGGTTGTGCAAGCACTAGAAGCGACCGGAGAGATCAACGGCAAACTTATCTGGAGTAATAC CGGTTATTTGATCAACTGGTATCTCACTGAGATGAAGCAACTGCTCGGCGAGGCTACTGTTGAATCGCTGCGCCATGCCC TCTTTTTTGAGAAAACGCTCACGAACGGTGAAGATAATCCACTCTGGCGTACCGTGGTACTGCGCGACGGCCTGCTGGTG CGCCGCACTTGCTGCCAGCGTTATCGCTTACCGGATGTGCAGCAATGTGGCTATTGTACGCTGAAATGA
Upstream 100 bases:
>100_bases TGATAATTTTTATCATTTGCAAGCCAGAGAAATCCCTTGCTATCGAGTAAACCTATCGCTAGGATTAGCAATCATTATCA TTTAGATTACTATCACGATT
Downstream 100 bases:
>100_bases AAGCACTGCCGGGGAAGTAAACCCGGCATCATGCGGATTAATAGGGATGCAACACATTACTTGCTTCGCAATGCCGCATA CATAACAGAATATCTGCGGC
Product: ferric iron reductase involved in ferric hydroximate transport
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRAMIAKHREHLLEFIRLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRN QPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLV RRTCCQRYRLPDVQQCGYCTLK
Sequences:
>Translated_262_residues MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRAMIAKHREHLLEFIRLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRN QPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETL ISQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLV RRTCCQRYRLPDVQQCGYCTLK >Mature_261_residues AYRSAPLYEDVIWRTHLQPQDAGLAQAVRAMIAKHREHLLEFIRLDEPAPLNAMTLAQWSSPNALSSLLAVYSDHIYRNQ PTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDVSPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETLI SQALVPVVQALEATGEINGKLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLVR RTCCQRYRLPDVQQCGYCTLK
Specific function: Involved in the reduction of ferric iron in cytoplasmic ferrioxamine B [H]
COG id: COG4114
COG function: function code R; Uncharacterized Fe-S protein
Gene ontology:
Cell location: Cytoplasm. Cell membrane; Peripheral membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790829, Length=262, Percent_Identity=97.3282442748092, Blast_Score=529, Evalue=1e-152,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008090 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF [H]
EC number: NA
Molecular weight: Translated: 30054; Mature: 29923
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYRSAPLYEDVIWRTHLQPQDAGLAQAVRAMIAKHREHLLEFIRLDEPAPLNAMTLAQW CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCC SSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDV CCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETLISQALVPVVQALEATGEING CHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLV EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCHHH RRTCCQRYRLPDVQQCGYCTLK HHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure AYRSAPLYEDVIWRTHLQPQDAGLAQAVRAMIAKHREHLLEFIRLDEPAPLNAMTLAQW CCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHCC SSPNALSSLLAVYSDHIYRNQPTMIRENKPLISLWAQWYIGLMVPPLMLALLTQEKALDV CCCHHHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC SPEHFHAEFHETGRVACFWVDVCEDKNATPHSPQQRMETLISQALVPVVQALEATGEING CHHHHHHHHHCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC KLIWSNTGYLINWYLTEMKQLLGEATVESLRHALFFEKTLTNGEDNPLWRTVVLRDGLLV EEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHHHHCCHHH RRTCCQRYRLPDVQQCGYCTLK HHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 9990318 [H]