| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is cysQ
Identifier: 30065493
GI number: 30065493
Start: 4442679
End: 4443419
Strand: Reverse
Name: cysQ
Synonym: S4537
Alternate gene names: 30065493
Gene position: 4443419-4442679 (Counterclockwise)
Preceding gene: 30065495
Following gene: 30065491
Centisome position: 96.61
GC content: 55.47
Gene sequence:
>741_bases ATGTTAGATCAAGTATGCCAGCTTGCACGGAATGCAGGCGATGCCATTATGCAGGTCTACGACGGGACGAAACCGATGGA CGTCGTCAGCAAAGCGGACAATTCTCCGGTAACGGCAGCGGATATTGCCGCTCACACCGTTATCATGGACGGTTTACGTA CGCTGGCACCGGATATTCCGGTCCTTTCTGAAGAAGATCCTCCCGGTTGGGAAGTCCGTCAGCACTGGCAGCGTTACTGG CTGGTAGACCCGCTGGATGGTACTAAAGAGTTTATTAAACGTAATGGCGAATTCACCGTTAACATTGCGCTCATTGACCA TGGCAAACCGATTTTAGGTGTGGTGTATGCGCCGGTAATGAACGTAATGTACAGCGCGGCAGAAGGCAAGGCCTGGAAAG AAGAGTGCGGTGTGCGCAAGCTGATTCAGGTCCGCGATGCGCGCCCGCCGCTGGTGGTTATCAGCCGTTCCCATGCAGAT GCGGAGCTGAAAGAGTATCTGCAACAGCTTGGCGAACATCAGACCACGTCCATCGGCTCTTCGCTGAAATTCTGCCTGGT GGCGGAAGGACAGGCGCAGCTGTACCCGCGCTTCGGACCAACGAATATTTGGGACACCGCCGCCGGACATGCTGTGGCTG CAGCTGCCGGAGCGCACGTTCACGACTGGCAGGGTAAACCGCTGGATTACACTCCGCGCGAGTCGTTCCTGAATCCGGGG TTCAGAGTGTCCATTTACTAA
Upstream 100 bases:
>100_bases GCTTTGAAAATGATGACACTATCACAGTTGGCGCATTCATTAACGATAGGGTATAAGTAAAACAATAAGTTAACACCGCT CACAGAGACGAGGTGGAGAA
Downstream 100 bases:
>100_bases ATTCAGATGGCAGAAACAGTGTATTTCCTGATTCTGCCATCCTGATTTATCCCAACCTAAAAAGTTATAAATAAAAAGAG ATTGTATTTAAAGTGCAAAA
Product: adenosine-3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 246; Mature: 246
Protein sequence:
>246_residues MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLAPDIPVLSEEDPPGWEVRQHWQRYW LVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHAD AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY
Sequences:
>Translated_246_residues MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLAPDIPVLSEEDPPGWEVRQHWQRYW LVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHAD AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY >Mature_246_residues MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLAPDIPVLSEEDPPGWEVRQHWQRYW LVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVMNVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHAD AELKEYLQQLGEHQTTSIGSSLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG FRVSIY
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=247, Percent_Identity=28.3400809716599, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI5031789, Length=247, Percent_Identity=28.3400809716599, Blast_Score=77, Evalue=2e-14, Organism=Escherichia coli, GI1790659, Length=246, Percent_Identity=98.780487804878, Blast_Score=507, Evalue=1e-145, Organism=Escherichia coli, GI1788882, Length=233, Percent_Identity=28.3261802575107, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI71995897, Length=265, Percent_Identity=28.3018867924528, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI71995905, Length=265, Percent_Identity=28.3018867924528, Blast_Score=79, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202572, Length=249, Percent_Identity=25.7028112449799, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6320493, Length=229, Percent_Identity=25.3275109170306, Blast_Score=62, Evalue=7e-11, Organism=Drosophila melanogaster, GI24641722, Length=230, Percent_Identity=26.9565217391304, Blast_Score=74, Evalue=1e-13, Organism=Drosophila melanogaster, GI21357303, Length=162, Percent_Identity=29.6296296296296, Blast_Score=67, Evalue=7e-12, Organism=Drosophila melanogaster, GI24664926, Length=235, Percent_Identity=24.2553191489362, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 27145; Mature: 27145
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: PS00629 IMP_1 ; PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLAPDIP CHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM CCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH NVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCC SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG CEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCHHHHCCCC FRVSIY EEEEEC >Mature Secondary Structure MLDQVCQLARNAGDAIMQVYDGTKPMDVVSKADNSPVTAADIAAHTVIMDGLRTLAPDIP CHHHHHHHHHCCCHHHHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC VLSEEDPPGWEVRQHWQRYWLVDPLDGTKEFIKRNGEFTVNIALIDHGKPILGVVYAPVM CCCCCCCCCHHHHHHHHHHEECCCCCHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHH NVMYSAAEGKAWKEECGVRKLIQVRDARPPLVVISRSHADAELKEYLQQLGEHQTTSIGS HHHHHHHCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHHHCC SLKFCLVAEGQAQLYPRFGPTNIWDTAAGHAVAAAAGAHVHDWQGKPLDYTPRESFLNPG CEEEEEEECCCCEECCCCCCCCCCCCCCCCHHHHHCCCCEECCCCCCCCCCCHHHHCCCC FRVSIY EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]