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The map label for this gene is ytfH

Identifier: 30065495

GI number: 30065495

Start: 4445678

End: 4446148

Strand: Reverse

Name: ytfH

Synonym: S4540

Alternate gene names: 30065495

Gene position: 4446148-4445678 (Counterclockwise)

Preceding gene: 30065499

Following gene: 30065493

Centisome position: 96.67

GC content: 51.8

Gene sequence:

>471_bases
ATGGGAAGTCTCCATCGTTTTGTCTTGTGTTTAAATACGCTAACACCTAAACTTACTTTTAGTAAGTACGTGCAAAAAGG
TAAGTATGAAATGAGTCAGGTTAGCCTGTCACAACAACTGAAAGAGGGTAATCTCTTTGCGGAACAGTGCCCGTCGCGCG
AGGTGTTGAAACACGTCACCAGCCGTTGGGGGGTGTTGATTCTGGTGGCGCTACGCGAAGGTACTCATCGCTTTAGCGAC
CTGCGGCGCAAAATCGGTGGGGTGAGTGAAAAGATGCTTGCGCAGTCGTTACAGGCGTTAGAACAGGATGGTTTTCTTAA
CCGTATCGCGTATCCGGTGGTGCCGCCGCATGTGGAATATAGCCTCACGCCGCTGGGCGAGCAGGTGAGCGAAAAGGTTG
CTGCACTGGCGGACTGGATTGAGTTGAATTTGCCCGAGGTGTTGGCGGTGCGGGATGAACGTGCGGCATAA

Upstream 100 bases:

>100_bases
ATTACGAACGATAGCCACTATTTGGCTGGCAGGAACCGTTTTCATCAAGGATTCAATAATATAGTGACCAAGTTGGCCAG
TGGCACCAGTAATAGCGATC

Downstream 100 bases:

>100_bases
CTGCCGGATGCGCTGCGCTTATCCGGTCTACGGTTCATGGCTTGTAGGGTGGATAAGATACGGCAGCATCGCATCCGCCA
ATAAATGCCGGATGCGGTTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MGSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSD
LRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA

Sequences:

>Translated_156_residues
MGSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSD
LRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
>Mature_155_residues
GSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVTSRWGVLILVALREGTHRFSDL
RRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEYSLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=126, Percent_Identity=100, Blast_Score=257, Evalue=3e-70,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17561; Mature: 17429

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVT
CCHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH
SRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEY
HHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCE
SLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC
>Mature Secondary Structure 
GSLHRFVLCLNTLTPKLTFSKYVQKGKYEMSQVSLSQQLKEGNLFAEQCPSREVLKHVT
CHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHH
SRWGVLILVALREGTHRFSDLRRKIGGVSEKMLAQSLQALEQDGFLNRIAYPVVPPHVEY
HHHHHHHHHHHHHCHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCE
SLTPLGEQVSEKVAALADWIELNLPEVLAVRDERAA
ECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]