| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yhjT
Identifier: 30065183
GI number: 30065183
Start: 4106253
End: 4106444
Strand: Reverse
Name: yhjT
Synonym: S4198
Alternate gene names: 30065183
Gene position: 4106444-4106253 (Counterclockwise)
Preceding gene: 30065184
Following gene: 30065182
Centisome position: 89.28
GC content: 47.92
Gene sequence:
>192_bases ATGATGACCATCAGCGATATCATTGAAATTATTATCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCA CTCTTTGCGACGCATTCGCGACACCTTACGTTTGTTCTTTGCTAAACCTCGTTATGTTAAACCGGCCGGGACGTTACGCC GCACGGAAAAAGCCAGGGCAACCAAAAAATGA
Upstream 100 bases:
>100_bases AAAGTTCTAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACGAATACCAGAACCCATGCGACTGTTAGAT GATGCTGTGGAGCGCTCATC
Downstream 100 bases:
>100_bases CTCAATTTACGCAAAATACCGCCATGCCTTCTTCCCTCTGGCAATACTGGCGCGGCCTTTCCGGCTGGAACTTCTATTTT CTGGTTAAGTTTGGCCTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 63; Mature: 63
Protein sequence:
>63_residues MMTISDIIEIIIVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARATKK
Sequences:
>Translated_63_residues MMTISDIIEIIIVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARATKK >Mature_63_residues MMTISDIIEIIIVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARATKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082285, Length=63, Percent_Identity=98.4126984126984, Blast_Score=125, Evalue=4e-31,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019995 - ProDom: PD053231 [H]
Pfam domain/function: PF11120 DUF2636 [H]
EC number: NA
Molecular weight: Translated: 7378; Mature: 7378
Theoretical pI: Translated: 11.80; Mature: 11.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTISDIIEIIIVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC TKK CCC >Mature Secondary Structure MMTISDIIEIIIVCALIFFPLGYLARHSLRRIRDTLRLFFAKPRYVKPAGTLRRTEKARA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHC TKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]