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The map label for this gene is yhjS

Identifier: 30065184

GI number: 30065184

Start: 4106441

End: 4108012

Strand: Reverse

Name: yhjS

Synonym: S4199

Alternate gene names: 30065184

Gene position: 4108012-4106441 (Counterclockwise)

Preceding gene: 30065192

Following gene: 30065183

Centisome position: 89.32

GC content: 48.92

Gene sequence:

>1572_bases
ATGAGGGACATTGTGGACCCTGTATTCTCTATCGGTATCTCATCATTATGGGATGAGCTGCGACATATGCCAGCAGGCGG
CGTCTGGTGGTTTAACGTCGATCGCCATGAAGATGCTATCAGTCTGGCGAATCAAACAATTGCATCCCAGGCTGAAACCG
CACACGTCGCGGTCATTAGCATGGACAGCGATCCGGCGAAAATCTTTCAATTAGATGATTCTCAAGGGCCGGAAAAAATA
AAATTATTTTCAATGCTAAATCATGAAAAAGGTCTATACTATTTGGCCCGTGATTTGCAGTGTTCTATTGATCCCCATAA
TTACCTTTTTATTCTTGTTTGCGCAAATAACGCATGGCAAAATATTCCTGCCGAGCGGCTTCGCTCATGGTTGGATAAAA
TGAATAAATGGAGCAGGTTAAACCATTGTTCGCTTTTGGTAATTAATCCCGGAAATAATAACGATAAACAATTTTCATTG
TTGCTTGAGGAATACCGTTCACTTTTTGGTCTTGCCAGTTTGCGTTTTCAGGGTGACCAACATTTGCTGGATATTGCCTT
CTGGTGCAACGAAAAAGGGGTCAGCGCCCGTCAGCAGCTTAGCGTTCAGCAACAAAATGGTATCTGGACATTAGTTCAAA
GCGAAGAGGCGGAGATCCAACCACGCAGCGACGAAAAACGCATTCTGAGTAATGTTGCTGTACTGGAAGGTGCGCCGCCG
CTATCGGAACACTGGCAACTGTTCAACAATAACGAAGTCCTGTTCAATGAAGCCCGTACCGCTCAGGCGGCGACGGTGGT
CTTTTCTTTACAGCAAAATGCGCAAATCGAGCCACTGGCCCGCAGCATTCATACCCTGCGTCGCCAGCGCGGTAGTGCGA
TGAAAATCCTCGTGCGGGAAAATACCGCTAGCCTGCGCGCCACCGATGAACGTTTGTTATTGGCCTGCGGTGCAAATATG
GTTATTCCGTGGAATGCGCCACTCTCCCGTTGTCTGACGATGATCGAAAGCGTGCAAGGGCAGAAGTTTAGTCGCTATGT
ACCGGAAGATATCACTACCTTGCTGTCAATGACCCAGCCGCTCAAACTGCGTGGTTTCCAGAAGTGGGATGTGTTCTGTA
ATGCCGTCAACAACATGATGAATAACCCTCTCTTGCCTGCCCACGGTAAAGGCGTTCTGGTTGCCCTACGTCCGGTACCG
GGTATCCGCGTTGAGCAAGCCCTGACGCTATGTCGCCCTAACCGTACCGGCGATATCATGACCATTGGCGGTAATCGGCT
GGTGCTGTTTCTCTCATTCTGTCGGATTAACGATCTGGATACCGCGTTGAATCATATTTTCCCATTGCCTACTGGCGACA
TTTTCTCAAACCGTATGGTCTGGTTTGAAGATGATCAAATCAGTGCCGAGCTGGTGCAGATGCGCCTGCTTGCCCCAGAA
CAATGGGGAATGCCGCTGCCTTTAACGCAAAGTTCTAAACCGGTCATCAATGCCGAGCACGATGGTCGCCACTGGCGACG
AATACCAGAACCCATGCGACTGTTAGATGATGCTGTGGAGCGCTCATCATGA

Upstream 100 bases:

>100_bases
CTAAATTGATTCACATGCTAAATCTGATAAGTTTTAATTTCAATGGTAGGTTTATTTCTTAGCTTTCGCTAGTAAACTGA
TAATCAGACAAAATGGTGAC

Downstream 100 bases:

>100_bases
TGACCATCAGCGATATCATTGAAATTATTATCGTTTGCGCACTGATATTTTTCCCGCTGGGCTATCTGGCGCGGCACTCT
TTGCGACGCATTCGCGACAC

Product: putative protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 523

Protein sequence:

>523_residues
MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDSQGPEKI
KLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Sequences:

>Translated_523_residues
MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDSQGPEKI
KLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
>Mature_523_residues
MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVISMDSDPAKIFQLDDSQGPEKI
KLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQNIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSL
LLEEYRSLFGLASLRFQGDQHLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRENTASLRATDERLLLACGANM
VIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQPLKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVP
GIRVEQALTLCRPNRTGDIMTIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789958, Length=523, Percent_Identity=99.8087954110899, Blast_Score=1076, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017745 [H]

Pfam domain/function: PF10995 DUF2819 [H]

EC number: NA

Molecular weight: Translated: 59399; Mature: 59399

Theoretical pI: Translated: 6.57; Mature: 6.57

Prosite motif: PS00228 TUBULIN_B_AUTOREG

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
MDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQ
ECCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCEEEECCCCEEEEEEECCCCCC
NIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE
HHHHHHEECCCEEEEECCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP
CCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCH
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
HCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MRDIVDPVFSIGISSLWDELRHMPAGGVWWFNVDRHEDAISLANQTIASQAETAHVAVIS
CCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEEE
MDSDPAKIFQLDDSQGPEKIKLFSMLNHEKGLYYLARDLQCSIDPHNYLFILVCANNAWQ
ECCCCCEEEEECCCCCCCHHHHHHHHCCCCCEEEEEECCEEEECCCCEEEEEEECCCCCC
NIPAERLRSWLDKMNKWSRLNHCSLLVINPGNNNDKQFSLLLEEYRSLFGLASLRFQGDQ
CCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHEEECCCC
HLLDIAFWCNEKGVSARQQLSVQQQNGIWTLVQSEEAEIQPRSDEKRILSNVAVLEGAPP
EEEEEEEEECCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHHHCCCCCC
LSEHWQLFNNNEVLFNEARTAQAATVVFSLQQNAQIEPLARSIHTLRRQRGSAMKILVRE
HHHHHHEECCCEEEEECCCCHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCEEEEEEEC
NTASLRATDERLLLACGANMVIPWNAPLSRCLTMIESVQGQKFSRYVPEDITTLLSMTQP
CCCCEEECCCEEEEEECCCEEEECCCHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHCCCC
LKLRGFQKWDVFCNAVNNMMNNPLLPAHGKGVLVALRPVPGIRVEQALTLCRPNRTGDIM
HHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCEE
TIGGNRLVLFLSFCRINDLDTALNHIFPLPTGDIFSNRMVWFEDDQISAELVQMRLLAPE
EECCCEEEEEEEHHHCCCHHHHHHHCCCCCCCCHHCCCEEEEECCCHHHHHHHHHHCCCH
QWGMPLPLTQSSKPVINAEHDGRHWRRIPEPMRLLDDAVERSS
HCCCCCCCCCCCCCEEECCCCCCHHHHCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]