| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yfaZ [H]
Identifier: 30063681
GI number: 30063681
Start: 2355920
End: 2356462
Strand: Reverse
Name: yfaZ [H]
Synonym: S2462
Alternate gene names: 30063681
Gene position: 2356462-2355920 (Counterclockwise)
Preceding gene: 30063683
Following gene: 30063680
Centisome position: 51.23
GC content: 53.59
Gene sequence:
>543_bases ATGAAAAAAATTGCGCTAGCAGGTCTGGCCGGAATGCTGTTGGTTTCTGCATCGGTCAATGCAATGAGCATCAGCGGCCA GGCGGGTAAAGAATACACCAATATTGGTGTCGGTTTTGGGACTGAATCGACGGGCCTGGCTTTAAGCGGTAACTGGACAC ATAACGACGACGACGGTGACGTCGCGGGCGTGGGGCTGGGGTTGAATCTGCCTCTCGGGCCGTTAATGGCGACCGTTGGC GGAAAAGGCGTGTACACCAACCCGAATTACGGCGATGAAGGTTATGCCGCAGCGGTAGGAGGTGGTTTGCAGTGGAAAAT TGGCAACAGCTTCCGTTTGTTTGGCGAGTATTACTACTCTCCGGATTCGCTCTCCAGCGGTATTCAAAGTTATGAGGAAG CGAATGCTGGCGCGCGTTACACCATTATGCGTCCAGTCAGTATTGAGGCGGGTTATCGCTACCTGAATCTGTCGGGTAAA GACGGTAACCGCGACAACGCTGTGGCTGACGGCCTGTATGTTGGGGTTAACGCCAGTTTCTGA
Upstream 100 bases:
>100_bases GTGACTAGATCCCTTTTTTCGCTCATTGAATCCTCTGTGCCAGGCAGTACAATCCCGCAGCTTTGGGAATTTTGATTAAT TGCTTGTGGGAAAGGGGATA
Downstream 100 bases:
>100_bases TCCCTTCCGGCGCGGCATTCAGTTTCTTACTACGCCTTATCTCCCTTTGCGTTATAGTGATTCGATAACAAAAGCAGGAG ATAACCATGTTAAAAGTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 180; Mature: 180
Protein sequence:
>180_residues MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVG GKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK DGNRDNAVADGLYVGVNASF
Sequences:
>Translated_180_residues MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVG GKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK DGNRDNAVADGLYVGVNASF >Mature_180_residues MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGDVAGVGLGLNLPLGPLMATVG GKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYSPDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGK DGNRDNAVADGLYVGVNASF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082072, Length=180, Percent_Identity=98.8888888888889, Blast_Score=352, Evalue=7e-99,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001702 - InterPro: IPR009998 [H]
Pfam domain/function: PF07437 YfaZ [H]
EC number: NA
Molecular weight: Translated: 18612; Mature: 18612
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD CCCEEHHHHHEEHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCC VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS EEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCEEEEECCEEEEEEEEEEC PDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGLYVGVNASF CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCEECCEEEEEECCC >Mature Secondary Structure MKKIALAGLAGMLLVSASVNAMSISGQAGKEYTNIGVGFGTESTGLALSGNWTHNDDDGD CCCEEHHHHHEEHHHHCCCCEEEECCCCCCEEEEEEEECCCCCCCEEEECCCCCCCCCCC VAGVGLGLNLPLGPLMATVGGKGVYTNPNYGDEGYAAAVGGGLQWKIGNSFRLFGEYYYS EEEEEEECCCCHHHHHHHCCCCEEECCCCCCCCCEEEEECCCEEEEECCEEEEEEEEEEC PDSLSSGIQSYEEANAGARYTIMRPVSIEAGYRYLNLSGKDGNRDNAVADGLYVGVNASF CHHHHHHHHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCCCCCCCCEECCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]