| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is cinA [C]
Identifier: 30063680
GI number: 30063680
Start: 2354631
End: 2355833
Strand: Reverse
Name: cinA [C]
Synonym: S2461
Alternate gene names: 30063680
Gene position: 2355833-2354631 (Counterclockwise)
Preceding gene: 30063681
Following gene: 30063679
Centisome position: 51.22
GC content: 54.11
Gene sequence:
>1203_bases ATGTTAAAAGTGGAAATGCTATCCACCGGGGATGAAGTGTTATACGGGCAAATCGTTGACACTAACGCTGCCTGGCTGGC CGATTTTTTCTTTCATCAGGGGCTGCCATTATCTCGCCGCAATACGGTGGGGGATAACCTTGATGACTTAGTCACCATTC TTCGCGAACGTAGTCAGCACGCCGATGTGCTGATCGTTAACGGCGGGCTGGGACCGACCAGCGATGATTTAAGCGCACTC GCCGCTGCGACAGCAAAAGGTGAAGGCCTGGTGCTGCATGAAGCCTGGCTCAAAGAGATGGAACGCTATTTCCACGAACG TGGACGAGTAATGGCACCGAGCAACCGTAAACAAGCGGAGCTGCCTGCCAGTGCTGAATTTATCAATAACCCGGTAGGCA CCGCCTGTGGTTTTGCCGTGCAGCTTAATCGTTGCCTGATGTTCTTTACTCCCGGCGTACCGTCAGAATTTAAGGTGATG GTCGAGCACGAAATCCTGCCGCGCCTGCGCGAGCGTTTTTCTTTACCACAGCCGCCGGTTTGTCTGCGTTTAACTACCTT TGGTCGTTCGGAAAGCGATCTGGCACAAAGCCTGGACACTCTACAACTGCCGCCGGGCGTAACAATGGGCTATCGCTCCT CAATGCCGATCATCGAACTGAAACTCACCGGACCGGCAAGCGAGCAACAGGCGATGGAAAAACTGTGGCTGGACGTTAAA CGTGTTGCCGGACAGAGCGTGATTTTCGAAGGCACCGAAGGACTGCCCGCGCAGATCAGTCGCGAATTGCAAAACCGCCA GTTCAGCCTGACGTTGAGCGAGCAATTCACCGGTGGTTTATTGGCTTTGCAACTTTCTCGCGCAGGTGCTCCATTGCTGG CGTGTGAAGTGATTCCTTCACAGGAAGAAACCCTGGCGCAAACTGCGCACTGGATTACAGAACGGCGGGCCAACCATTTT GCCGGGCTGGCACTGGCTGTTTCGGGTTTCGAGAACGAGCATCTCAACTTTGCGCTAGCCACGCCAGACGGCACTTTCGC TCTGCGTGTGCGTTTCAGCACTACACGCTACAGCCTGGCTATCCGTCAGGAAGTGTGCGCAATGATGGCACTGAATATGC TACGCCGTTGGTTAAACGGCCAGGACATCGCTAGTGAGCATGGCTGGATTGAGGTTGTTGAGTCCATGACTTTATCCGTC TGA
Upstream 100 bases:
>100_bases ACGCCAGTTTCTGATCCCTTCCGGCGCGGCATTCAGTTTCTTACTACGCCTTATCTCCCTTTGCGTTATAGTGATTCGAT AACAAAAGCAGGAGATAACC
Downstream 100 bases:
>100_bases TTTCGCCACTCTGTGCCGGTTTACTGCACCGGCACATTCCCCCTCCGGCAAAATTTGTCCAACCCTCCCTACGGTGAGCG TGGTGTTGGGGCCAGTGTGG
Product: competence damage-inducible protein A
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 400
Protein sequence:
>400_residues MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSAL AAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVIPSQEETLAQTAHWITERRANHF AGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV
Sequences:
>Translated_400_residues MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSAL AAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVIPSQEETLAQTAHWITERRANHF AGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV >Mature_400_residues MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQHADVLIVNGGLGPTSDDLSAL AAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAELPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVM VEHEILPRLRERFSLPQPPVCLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVIPSQEETLAQTAHWITERRANHF AGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLAIRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV
Specific function: Unknown
COG id: COG1058
COG function: function code R; Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CinA family [H]
Homologues:
Organism=Escherichia coli, GI1788583, Length=400, Percent_Identity=99.5, Blast_Score=817, Evalue=0.0, Organism=Saccharomyces cerevisiae, GI6323832, Length=173, Percent_Identity=27.7456647398844, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008135 - InterPro: IPR020817 - InterPro: IPR001453 [H]
Pfam domain/function: PF00994 MoCF_biosynth [H]
EC number: NA
Molecular weight: Translated: 44266; Mature: 44266
Theoretical pI: Translated: 5.29; Mature: 5.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQH CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC ADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAE CCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCC LPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPV CCCHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE CLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVIPS HHCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCC QEETLAQTAHWITERRANHFAGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLA CHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCEEEEEEEEECCHHHHH IRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure MLKVEMLSTGDEVLYGQIVDTNAAWLADFFFHQGLPLSRRNTVGDNLDDLVTILRERSQH CEEEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC ADVLIVNGGLGPTSDDLSALAAATAKGEGLVLHEAWLKEMERYFHERGRVMAPSNRKQAE CCEEEEECCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHCCCEECCCCCCCCC LPASAEFINNPVGTACGFAVQLNRCLMFFTPGVPSEFKVMVEHEILPRLRERFSLPQPPV CCCHHHHHCCCCCHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCE CLRLTTFGRSESDLAQSLDTLQLPPGVTMGYRSSMPIIELKLTGPASEQQAMEKLWLDVK EEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHH RVAGQSVIFEGTEGLPAQISRELQNRQFSLTLSEQFTGGLLALQLSRAGAPLLACEVIPS HHCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCEEEEEECCCCCCEEEEEECCC QEETLAQTAHWITERRANHFAGLALAVSGFENEHLNFALATPDGTFALRVRFSTTRYSLA CHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCEEEEEECCCCEEEEEEEEECCHHHHH IRQEVCAMMALNMLRRWLNGQDIASEHGWIEVVESMTLSV HHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA