| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is yehR
Identifier: 30063558
GI number: 30063558
Start: 2202196
End: 2202657
Strand: Direct
Name: yehR
Synonym: S2319
Alternate gene names: 30063558
Gene position: 2202196-2202657 (Clockwise)
Preceding gene: 30063555
Following gene: 30063563
Centisome position: 47.88
GC content: 42.64
Gene sequence:
>462_bases ATGAAGGCTTTCAATAAGCTGTTTTCCCTCGTTGTTGCATCTGTTCTGGTTTTCTCTCTTGCTGGCTGCGGTGACAAAGA AGAATCGAAGAAATTCAGCGCCAATCTGAACGGCACTGAAATTGCCATTACCTATGTCTACAAAGGTGACAAGGTGCTTA AGCAATCTTCTGAAACCAAAATTCAATTTGCCTCCATTGGTGCAACCACCAAAGAAGATGCTGCCAAGACACTTGAGCCG TTAAGCGCCAAATACAAAAACATCGCGGGTGTTGAAGAAAAATCAACCTATACCGATACCTACGCGCAGGAAAACGTGAC TATCGATATGGAAAAAGTGGATTTTAAAGCCCTGCAGGGTATTTCAGGAATCAACGTTTCTGCTGAAGATGCCAAAAAAG GTATCACTATGGCGCAAATGGAACTGGTGATGAAAGCCGCTGGTTTTAAAGAAGTGAAATAA
Upstream 100 bases:
>100_bases TGGAAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCACCAGTTTCTTGAT TAAATAAAATGGAGTTTTAC
Downstream 100 bases:
>100_bases TCTGTCGGCGGCCATGTTTCGCATGGCCGCCATACCCGTCTTAGCTTTTCTTCACATGCTGGCGCGCTGCCAGTCCACGC AGAAAATAACGTAAAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 153; Mature: 153
Protein sequence:
>153_residues MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEP LSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
Sequences:
>Translated_153_residues MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEP LSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK >Mature_153_residues MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETKIQFASIGATTKEDAAKTLEP LSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQGISGINVSAEDAKKGITMAQMELVMKAAGFKEVK
Specific function: Unknown
COG id: COG4808
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To L.monocytogenes lmo0207 [H]
Homologues:
Organism=Escherichia coli, GI87082051, Length=153, Percent_Identity=99.3464052287582, Blast_Score=300, Evalue=3e-83,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009736 [H]
Pfam domain/function: PF06998 DUF1307 [H]
EC number: NA
Molecular weight: Translated: 16568; Mature: 16568
Theoretical pI: Translated: 8.39; Mature: 8.39
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETK CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCCCCCE IQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQG EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCC ISGINVSAEDAKKGITMAQMELVMKAAGFKEVK CCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MKAFNKLFSLVVASVLVFSLAGCGDKEESKKFSANLNGTEIAITYVYKGDKVLKQSSETK CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCCCEEEEEEEECCCHHHHCCCCCE IQFASIGATTKEDAAKTLEPLSAKYKNIAGVEEKSTYTDTYAQENVTIDMEKVDFKALQG EEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCC ISGINVSAEDAKKGITMAQMELVMKAAGFKEVK CCCCCCCHHHHHCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]