Definition Shigella flexneri 2a str. 2457T, complete genome.
Accession NC_004741
Length 4,599,354

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The map label for this gene is yehQ

Identifier: 30063555

GI number: 30063555

Start: 2199292

End: 2201295

Strand: Direct

Name: yehQ

Synonym: S2316

Alternate gene names: 30063555

Gene position: 2199292-2201295 (Clockwise)

Preceding gene: 30063554

Following gene: 30063558

Centisome position: 47.82

GC content: 54.39

Gene sequence:

>2004_bases
ATGAATTCACTACGTCCGGAATTATTAGAACTGACACCGCAGGCACTGACGGCGTTAAGCAATGCCGGTTTTGTTAAGCG
CAGCCTTAAGGAACTGGAAAATGGCAACGTCCCGGAAATCAGCCATGAGAACAGCGCTTTAATCGCCACCTTCAGTGACG
GTGTCCGTACCCAGCTGGCGAACGGCCAGGCACTGAAAGAGGCTCAGTGCACCTATGGGGCCAGCGGCATGTGCCGTCAT
CGCGTGATGCTGGTGTTAAGTTATCAACGACTTTGTGCTACCGCCCAGCCTACGGGAAAAGAAGAGGAATGGGATCCGGC
AATCTGGCTGGAAGAACTGGCTACCCTTCCCGATGCCACCCGCAAACGCGCACAGGCGCTGGTCGCTAAAAGCATCACCA
TTGAGTTGTTCTGTGCGCCGGGTGAAATTCCCTCTGCCCGCTTACCGATGAGCGATGTGCGTTTTTATTCCCGCAGCAGT
ATTCGTTTCGCCCGTTGTGATTGTATTGAAGGCACACTTTGCGAACATGTCGTACTGGCAGTACAGGCCTTTGTCCAGGC
AAAAGCGCAGCAAGCGGAATTGACTCATTTAATCTGGCAGATGCGCAGCGAACACGTCACATCATCTGACGATCCGTTTG
CCAGCGAAGAAGGCAAAACGTGTCGTCAATATGTTCAACAACTAAGCCAGGCATTATGGCTGAGCGGCATCAGCCAGCCG
CTTATTCACTACGAGGCCGCTTTCAGCCGCGCGCAGCAAGCAGCGGAACGCTGCAGCTGGCGATGGGTGAGTGAATCGCT
ACGGCAACTGCGCGCCAGCGTTGATGCCTTCCACGCCCGCGCCAGCCACTATCATGCCGGAGAATGCTTACGTCAGCTTG
CGGCATTAAACAGTCGATTAAATTGCGCACAAGAGATGGCCCGGAGCGACAGTGTTGGTGAAGTTCCTCCTGTGCCGTGG
CGCACGGTCGTTGGCTCTGGCATTGCCGGAGAAGCAAAGCTTGATCATCTGCGGCTGGTGTCTTTAGGTATGCGTTGCTG
GCAGGATATTGAGCATTATGGTTTACGCATCTGGTTTACCGATCCCGACACCGGCAGTATTTTGCACCTTTCGCGCAGTT
GGCCGCGAAGTGAACAGGAAGACTCACCGGCAGCTACGCGTCGGCTGTTTAGTTTTCAGGCTGGCGCACTGGCGGGTGGG
CAAATTGTTTCACAAGCAGCAAAACGCAGTGCCGATGGCGAGCTGCTGTTAGCTACCCGCAACCGCTTAAGCAGCGTTGT
ACCGCTGTCGCCTGATGCCTGGCAAATGTTGAGCGCGCCGTTACGCCAGCCGGGCATTGTGGCTTTGCGGGAATATTTAC
GCCAGCGTCCCCCCGCCTGCATACGGCCTCTTAATCAGGTCGATAACTTATTTATTCTGCCGGTCGCTGAGTGTATTTCG
CTCGGTTGGGATAGCAGCCGCCAGACGCTGGATGCGCAGGTAATCAGCGGCGAAGGTGAAGATAATCTGCTGACGTTATC
ACTGCCAGCCTCAGCCAGCGCGCCTTATGCCATTGAACGCATGGCGGCGCTTTTGCAACAAACAGACGACCCCGTGTGTC
TGGTTTCTGGCTTTGTCAGTTTTGTTGATGGGCAATTGACACTGGAACCACAGGTAATGATGACAAAGACTCGTGCCTGG
GCGCTGGACGCAGAAACTGCGCCTGTGGTGGTATCACTACCTTCTGCCAGCGTTCTGCCTGTGCCGTCTACTGCTCATCA
GTTGCTGATGCGCTGCCAGGCGTTACTTATTCAACTGCTCCATAACGGCTGGCGCTATCAGGAACAGAGCGCTATTAATC
AGGCAGAGTTGCTGGCGAATGACCTCACCGCGGTGGGTTTTTATCGGCTGGCACATGTGTTGGCACAATTTCGTAATACA
GAAAGCGAGGCACGGGTAGAAGCAATGAATAACGGTGTTTTGCTTTGCGAACAATTATTCCCCATGCTTCAGCAACAAGG
ATGA

Upstream 100 bases:

>100_bases
ATGACCGCGATACGGCCCAGGCGCTGGTTAATGTCGGCGCACAAATAGCCGCCATGACACCGGGCGAGCTGGCATCATGG
CTTGCGGAGAATCTTCAGTC

Downstream 100 bases:

>100_bases
AATAGTGCTTTTTACTAAGAGTTCTACTCCAGTTCCGGACTGCTCACGCCACGGTATTAGGCATATCCTATATAGCCCCT
GGTGAGAGTCACCAGTTGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 667; Mature: 667

Protein sequence:

>667_residues
MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENSALIATFSDGVRTQLANGQALKEAQCTYGASGMCRH
RVMLVLSYQRLCATAQPTGKEEEWDPAIWLEELATLPDATRKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSS
IRFARCDCIEGTLCEHVVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLSGISQP
LIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSRLNCAQEMARSDSVGEVPPVPW
RTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQEDSPAATRRLFSFQAGALAGG
QIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS
LGWDSSRQTLDAQVISGEGEDNLLTLSLPASASAPYAIERMAALLQQTDDPVCLVSGFVSFVDGQLTLEPQVMMTKTRAW
ALDAETAPVVVSLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAINQAELLANDLTAVGFYRLAHVLAQFRNT
ESEARVEAMNNGVLLCEQLFPMLQQQG

Sequences:

>Translated_667_residues
MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENSALIATFSDGVRTQLANGQALKEAQCTYGASGMCRH
RVMLVLSYQRLCATAQPTGKEEEWDPAIWLEELATLPDATRKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSS
IRFARCDCIEGTLCEHVVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLSGISQP
LIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSRLNCAQEMARSDSVGEVPPVPW
RTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQEDSPAATRRLFSFQAGALAGG
QIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS
LGWDSSRQTLDAQVISGEGEDNLLTLSLPASASAPYAIERMAALLQQTDDPVCLVSGFVSFVDGQLTLEPQVMMTKTRAW
ALDAETAPVVVSLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAINQAELLANDLTAVGFYRLAHVLAQFRNT
ESEARVEAMNNGVLLCEQLFPMLQQQG
>Mature_667_residues
MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENSALIATFSDGVRTQLANGQALKEAQCTYGASGMCRH
RVMLVLSYQRLCATAQPTGKEEEWDPAIWLEELATLPDATRKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSS
IRFARCDCIEGTLCEHVVLAVQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLSGISQP
LIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSRLNCAQEMARSDSVGEVPPVPW
RTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFTDPDTGSILHLSRSWPRSEQEDSPAATRRLFSFQAGALAGG
QIVSQAAKRSADGELLLATRNRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS
LGWDSSRQTLDAQVISGEGEDNLLTLSLPASASAPYAIERMAALLQQTDDPVCLVSGFVSFVDGQLTLEPQVMMTKTRAW
ALDAETAPVVVSLPSASVLPVPSTAHQLLMRCQALLIQLLHNGWRYQEQSAINQAELLANDLTAVGFYRLAHVLAQFRNT
ESEARVEAMNNGVLLCEQLFPMLQQQG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 SWIM-type zinc fingers [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007527 [H]

Pfam domain/function: PF04434 SWIM [H]

EC number: NA

Molecular weight: Translated: 73641; Mature: 73641

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: PS50966 ZF_SWIM L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENSALIATFSDGVRTQLA
CCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHC
NGQALKEAQCTYGASGMCRHRVMLVLSYQRLCATAQPTGKEEEWDPAIWLEELATLPDAT
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHH
RKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA
HHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
VQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLSGISQP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
LIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NCAQEMARSDSVGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT
HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
DPDTGSILHLSRSWPRSEQEDSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEH
NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS
HHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCHHHHCCEEEEEHHHHHH
LGWDSSRQTLDAQVISGEGEDNLLTLSLPASASAPYAIERMAALLQQTDDPVCLVSGFVS
CCCCCCCHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
FVDGQLTLEPQVMMTKTRAWALDAETAPVVVSLPSASVLPVPSTAHQLLMRCQALLIQLL
HHCCCEEECCHHHEEHHHHEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
HNGWRYQEQSAINQAELLANDLTAVGFYRLAHVLAQFRNTESEARVEAMNNGVLLCEQLF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHH
PMLQQQG
HHHHCCC
>Mature Secondary Structure
MNSLRPELLELTPQALTALSNAGFVKRSLKELENGNVPEISHENSALIATFSDGVRTQLA
CCCCCCHHHHHCHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHC
NGQALKEAQCTYGASGMCRHRVMLVLSYQRLCATAQPTGKEEEWDPAIWLEELATLPDAT
CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCHHH
RKRAQALVAKSITIELFCAPGEIPSARLPMSDVRFYSRSSIRFARCDCIEGTLCEHVVLA
HHHHHHHHHHCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCEEEECCCCCCHHHHHHHHH
VQAFVQAKAQQAELTHLIWQMRSEHVTSSDDPFASEEGKTCRQYVQQLSQALWLSGISQP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHH
LIHYEAAFSRAQQAAERCSWRWVSESLRQLRASVDAFHARASHYHAGECLRQLAALNSRL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
NCAQEMARSDSVGEVPPVPWRTVVGSGIAGEAKLDHLRLVSLGMRCWQDIEHYGLRIWFT
HHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEE
DPDTGSILHLSRSWPRSEQEDSPAATRRLFSFQAGALAGGQIVSQAAKRSADGELLLATR
CCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCEEEEEH
NRLSSVVPLSPDAWQMLSAPLRQPGIVALREYLRQRPPACIRPLNQVDNLFILPVAECIS
HHHHCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHCCHHHHCCEEEEEHHHHHH
LGWDSSRQTLDAQVISGEGEDNLLTLSLPASASAPYAIERMAALLQQTDDPVCLVSGFVS
CCCCCCCHHHHHEEECCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHH
FVDGQLTLEPQVMMTKTRAWALDAETAPVVVSLPSASVLPVPSTAHQLLMRCQALLIQLL
HHCCCEEECCHHHEEHHHHEEECCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
HNGWRYQEQSAINQAELLANDLTAVGFYRLAHVLAQFRNTESEARVEAMNNGVLLCEQLF
HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCEEEHHHHH
PMLQQQG
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]