| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is mdtI [H]
Identifier: 30063113
GI number: 30063113
Start: 1687096
End: 1687425
Strand: Reverse
Name: mdtI [H]
Synonym: S1752
Alternate gene names: 30063113
Gene position: 1687425-1687096 (Counterclockwise)
Preceding gene: 30063114
Following gene: 30063110
Centisome position: 36.69
GC content: 51.82
Gene sequence:
>330_bases ATGGCGCAGTTTGAATGGGTTCACGCCGCCTGGCTGGCATTGGCAATCGTGCTGGAAATCGTTGCTAACGTCTTTTTGAA ATTTTCTGACGGCTTTCGTCGCAAAATATTTGGCTTGCTCTCCCTGGCGGCGGTGCTGGCGGCCTTTAGTGCGCTTTCTC AGGCCGTTAAAGGGATCGACTTGTCTGTCGTTTATGCATTGTGGGGCGGGTTTGGTATTGCCGCCACGTTAGCCGCAGGT TGGATCTTGTTTGGTCAACGGTTAAATCGTAAAGGCTGGATTGGCCTGGTCTTGCTGTTGGCTGGAATGATCATGGTGAA ACTTGCCTGA
Upstream 100 bases:
>100_bases TCGCTGATGAAAATTGCCGGGTTAACCACCCTGGTCGCCGGGATAGTGTTGATCAAATCAGGTACCCGTAAAGCGCGTAA ACCTGAACTGGAGGTGAACC
Downstream 100 bases:
>100_bases TGAAGACGCTGCCCGCGCTGTCGGGCAGCGTTTGAACATTATTTTTGCGACAGTTGATCCAGCTTGTCGCGAAAACCGGT AACAGAAATGGCCCGGTTAT
Product: multidrug efflux system protein MdtI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 109; Mature: 108
Protein sequence:
>109_residues MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGIDLSVVYALWGGFGIAATLAAG WILFGQRLNRKGWIGLVLLLAGMIMVKLA
Sequences:
>Translated_109_residues MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGIDLSVVYALWGGFGIAATLAAG WILFGQRLNRKGWIGLVLLLAGMIMVKLA >Mature_108_residues AQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGIDLSVVYALWGGFGIAATLAAGW ILFGQRLNRKGWIGLVLLLAGMIMVKLA
Specific function: Catalyzes the excretion of spermidine [H]
COG id: COG2076
COG function: function code P; Membrane transporters of cations and cationic drugs
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the small multidrug resistance (SMR) protein family. MdtI subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787883, Length=109, Percent_Identity=99.0825688073395, Blast_Score=202, Evalue=3e-54, Organism=Escherichia coli, GI1786755, Length=98, Percent_Identity=33.6734693877551, Blast_Score=60, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000390 [H]
Pfam domain/function: PF00893 Multi_Drug_Res [H]
EC number: NA
Molecular weight: Translated: 11748; Mature: 11617
Theoretical pI: Translated: 10.98; Mature: 10.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGID CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LSVVYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AQFEWVHAAWLALAIVLEIVANVFLKFSDGFRRKIFGLLSLAAVLAAFSALSQAVKGID CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH LSVVYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMIMVKLA HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA