| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063098
Identifier: 30063098
GI number: 30063098
Start: 1668998
End: 1669498
Strand: Reverse
Name: 30063098
Synonym: S1730
Alternate gene names: NA
Gene position: 1669498-1668998 (Counterclockwise)
Preceding gene: 30063099
Following gene: 30063097
Centisome position: 36.3
GC content: 52.3
Gene sequence:
>501_bases ATGACTTCTGACAATAAGCAGGAATACACCATTCATATCTTCGGTCAGGACATCACCAGTCAGGACGGATTGTTTCGACT GGATGAGATACGCCGGGTAGGCATTCAGATTGGTAAGGTAGAAGATAACCGTAGTACCGAGGTTGCTCGCTTCATGAGGA CCAAGGCTGGTAGAAGTCTAACCAACCCAGAAAACGGGTTTGTTAAAAAGATTAACATGGGTCACTTAGGGACCTCGTGG CTGGCTGACCCAGTAGCCGCTATAGAGTTCGGTCGGTGGTTGGACCTTGGGTACGGACTGGCAGTAACCCGAGCCTTCGT GTCTATGACCTCCAGCGCCACCGTGCAGTCTGCTGTAGCGTCTGCTGAGGACATCAAGCCGGAGACCAAGGAATTCATCC AGCGTCATGGCACAGGCCTCTACATCGCCGGACGTGAAGTCTCACAGGCTGAGTATTCAGACTATCAAGCTGTGACCGCT GGTCGCTGTGAGTGGAGGTAA
Upstream 100 bases:
>100_bases GATAAGCTGGTCCCACCTGATGCCGAACGCCTTCAGGCGAAAGCTGACCAAGAACAGCGCTTCAAGTCCTTTGCCGAAGC TCTGGCGGGAGGTGCCTCTT
Downstream 100 bases:
>100_bases GTAATCATGGCTATGATTGACCCTCGTACACCTATCGGCAAAGCGACCCTTCGTTACCGTGGCCTGCCCACACGTCATCT GCTGTCTCTGCTGAGACTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MTSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNRSTEVARFMRTKAGRSLTNPENGFVKKINMGHLGTSW LADPVAAIEFGRWLDLGYGLAVTRAFVSMTSSATVQSAVASAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTA GRCEWR
Sequences:
>Translated_166_residues MTSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNRSTEVARFMRTKAGRSLTNPENGFVKKINMGHLGTSW LADPVAAIEFGRWLDLGYGLAVTRAFVSMTSSATVQSAVASAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTA GRCEWR >Mature_165_residues TSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNRSTEVARFMRTKAGRSLTNPENGFVKKINMGHLGTSWL ADPVAAIEFGRWLDLGYGLAVTRAFVSMTSSATVQSAVASAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTAG RCEWR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18497; Mature: 18366
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNRSTEVARFMRTKAGRSL CCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCC TNPENGFVKKINMGHLGTSWLADPVAAIEFGRWLDLGYGLAVTRAFVSMTSSATVQSAVA CCCCCCEEEEEECCCCCCHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHHHCCHHHHHHHH SAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTAGRCEWR HHHCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCEEECCCCCCC >Mature Secondary Structure TSDNKQEYTIHIFGQDITSQDGLFRLDEIRRVGIQIGKVEDNRSTEVARFMRTKAGRSL CCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCEEEECCCCCCHHHHHHHHHHHCCCCC TNPENGFVKKINMGHLGTSWLADPVAAIEFGRWLDLGYGLAVTRAFVSMTSSATVQSAVA CCCCCCEEEEEECCCCCCHHHHCHHHHHHHCCHHHCCHHHHHHHHHHHHHCCHHHHHHHH SAEDIKPETKEFIQRHGTGLYIAGREVSQAEYSDYQAVTAGRCEWR HHHCCCHHHHHHHHHCCCEEEEECCCCCCHHCCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA