| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30063099
Identifier: 30063099
GI number: 30063099
Start: 1669488
End: 1670003
Strand: Reverse
Name: 30063099
Synonym: S1731
Alternate gene names: NA
Gene position: 1670003-1669488 (Counterclockwise)
Preceding gene: 30063100
Following gene: 30063098
Centisome position: 36.31
GC content: 51.36
Gene sequence:
>516_bases ATGAATACCGAATTACCAGTAACTAACCGCCAGTTCTTAATCATCCTGCTGACCAATGCAGAGTCCAGTGTCGATTGCTG TCGCTATAACTTAGACCTGCTGAAGTTATCCCGATGGTATGCCCAGGCGGAAGACTGGGACTATGAGAAAATCCGGGAGA TGTACGCGGAGCCTATCCAGTCATACCTCCAGACACACACCGAGGAAGAGCTGAAGCGTGGCCTGCAGGACATCTTCTAT TTCAACAATCCTTACACCTGTGAGGGTGACTCAGAAGAGATGGATTGGATAGCGTCACGCTCTGATGCCGACTTGAAGCA CATCTCTAACGCGATGATGCAGGTGGAGAGCAAATGGTCCCGCCGCCTTCAGGTCCTAACTGAAGATTACGAAAACGGCA CCTTTGATAAGCTGGTCCCACCTGATGCCGAACGCCTTCAGGCGAAAGCTGACCAAGAACAGCGCTTCAAGTCCTTTGCC GAAGCTCTGGCGGGAGGTGCCTCTTATGACTTCTGA
Upstream 100 bases:
>100_bases CTTTCGTTAAGCACTTTCTGATGGGTCCGTTTAGGATGCGTCTGAATGGTGCGGACTCCATGTGGAGACAGAAAGTGCTT TACCAAAGGAGCATCTTTGT
Downstream 100 bases:
>100_bases CAATAAGCAGGAATACACCATTCATATCTTCGGTCAGGACATCACCAGTCAGGACGGATTGTTTCGACTGGATGAGATAC GCCGGGTAGGCATTCAGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAEDWDYEKIREMYAEPIQSYLQTHTEEELKRGLQDIFY FNNPYTCEGDSEEMDWIASRSDADLKHISNAMMQVESKWSRRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFA EALAGGASYDF
Sequences:
>Translated_171_residues MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAEDWDYEKIREMYAEPIQSYLQTHTEEELKRGLQDIFY FNNPYTCEGDSEEMDWIASRSDADLKHISNAMMQVESKWSRRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFA EALAGGASYDF >Mature_171_residues MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAEDWDYEKIREMYAEPIQSYLQTHTEEELKRGLQDIFY FNNPYTCEGDSEEMDWIASRSDADLKHISNAMMQVESKWSRRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFA EALAGGASYDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20049; Mature: 20049
Theoretical pI: Translated: 4.25; Mature: 4.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAEDWDYEKIREMYAEPIQ CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SYLQTHTEEELKRGLQDIFYFNNPYTCEGDSEEMDWIASRSDADLKHISNAMMQVESKWS HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFAEALAGGASYDF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNTELPVTNRQFLIILLTNAESSVDCCRYNLDLLKLSRWYAQAEDWDYEKIREMYAEPIQ CCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH SYLQTHTEEELKRGLQDIFYFNNPYTCEGDSEEMDWIASRSDADLKHISNAMMQVESKWS HHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH RRLQVLTEDYENGTFDKLVPPDAERLQAKADQEQRFKSFAEALAGGASYDF HHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA