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The map label for this gene is ydiS

Identifier: 30063034

GI number: 30063034

Start: 1602700

End: 1603989

Strand: Reverse

Name: ydiS

Synonym: S1649

Alternate gene names: 30063034

Gene position: 1603989-1602700 (Counterclockwise)

Preceding gene: 30063035

Following gene: 30063033

Centisome position: 34.87

GC content: 54.5

Gene sequence:

>1290_bases
ATGTCGGATGACAAATTTGATGCCATTGTGGTCGGTGCGGGCGTTGCTGGTAGCGTTGCCGCACTGGTCATGGCACGAGC
CGGGTTGGATGTCCTGGTGATAGAACGCGGCGACAGTGCCGGATGTAAAAACATGACCGGCGGGCGTCTTTATGCCCACA
CACTTGAAGCAATCATTCCAGGCTTTGCAGTATCAGCGCCGGTAGAACGCAAGGTCACACGCGAGAAAATCTCCTTCTTA
ACCGAAGAAAGCGCCGTTACCCTCGATTTTCACCGCGGGCAACCAGATGTTCCTCAACACGCATCTTATACCGTATTGCG
TAATCGTCTGGACCCGTGGTTGATGGAACAAGCCGAGCAGGCGGGCGCGCAGTTTATCCCAGGCGTTCGCGTCGACGCGC
TGGTTCGTGAAGGAAACAAGGTCACTGGCGTGCAGGCTGGGGATGATATTCTCGAAGCGAATGTGGTGATTCTGGCTGAT
GGCGTTAACTCGATGCTTGGCCGCTCGCTGGGAATGGTTCCCGCTTCCGATCCGCATCATTACGCTGTTGGTGTTAAAGA
GGTTATTGGCCTCACACCAGAACAGATCAACGATCGCTTTAATATTACGGGCGAGGAAGGTGCCGCCTGGCTGTTTGCCG
GTTCCCCTTCTGACGGCCTGATGGCCGGGGGATTTCTCTATACCAACAAGGATTCCATATCCTTGGGGCTGGTTTGTGGA
TTGGGTGATATCGCCCATGCGCAAAAAAGCGTGCCGCAAATGCTGGAAGATTTTAAACAACACCCCGCCATTCGCCCGCT
GATTAGCGGCGGCAAACTGCTTGAATATTCCGCGCATATGGTGCCGGAAGGCGGTCTGGCAATGGTGCCGCAACTGGTTA
ACGAGGGCGTGATGATCGTTGGTGACGCCGCAGGCTTCTGCCTGAATTTGGGTTTTACGGTCCGCGGCATGGATTTAGCC
ATTGCATCGGCTCAGGCTGCCGCCACAACGGTGATCGCCGCCAAAGAACGCGCGGATTTCTCCGCCAACAGTCTGGCGCA
ATACAAACGTGAGCTGGAACAAAGCTGCGTCATGCGTGATATGCAGCATTTTCGCAAGATCCCGGCGCTGATGGAAAACC
CGCGCCTGTTTAGCCAATACCCACGAATGGTAGCCGACATCATGAACGAGATGTTCACCATTGACGGCAAACCAAACCAG
CCGGTACGCAAAATGATCATGGGACACGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGCATTAAGGGAGCAAC
CGCGCTATGA

Upstream 100 bases:

>100_bases
ATCTACAAAGTCGTCCCTGCCCTGATTAGCCAGTTGAGCCGCTAATTCCCCTTTCAACCACATCTCCCGCTGTAAACGCA
GCAGGAAGGGAGCATAACGC

Downstream 100 bases:

>100_bases
GCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATATCATT
CTGACGGAAAATCCCGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 429; Mature: 428

Protein sequence:

>429_residues
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFL
TEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMAGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSANSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL

Sequences:

>Translated_429_residues
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFL
TEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILAD
GVNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMAGGFLYTNKDSISLGLVCG
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLA
IASAQAAATTVIAAKERADFSANSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQ
PVRKMIMGHAKKIGLINLLKDGIKGATAL
>Mature_428_residues
SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIPGFAVSAPVERKVTREKISFLT
EESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQAGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADG
VNSMLGRSLGMVPASDPHHYAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMAGGFLYTNKDSISLGLVCGL
GDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIVGDAAGFCLNLGFTVRGMDLAI
ASAQAAATTVIAAKERADFSANSLAQYKRELEQSCVMRDMQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQP
VRKMIMGHAKKIGLINLLKDGIKGATAL

Specific function: Probably accepts electrons from ydiQ/ydiR and reduces a quinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF-QO/fixC family [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=398, Percent_Identity=26.6331658291457, Blast_Score=117, Evalue=3e-26,
Organism=Escherichia coli, GI1787991, Length=429, Percent_Identity=99.3006993006993, Blast_Score=871, Evalue=0.0,
Organism=Escherichia coli, GI1786227, Length=429, Percent_Identity=61.3053613053613, Blast_Score=532, Evalue=1e-152,
Organism=Escherichia coli, GI87082155, Length=428, Percent_Identity=42.0560747663551, Blast_Score=333, Evalue=9e-93,
Organism=Caenorhabditis elegans, GI25144720, Length=442, Percent_Identity=25.5656108597285, Blast_Score=116, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324932, Length=418, Percent_Identity=25.3588516746411, Blast_Score=103, Evalue=6e-23,
Organism=Drosophila melanogaster, GI24652256, Length=408, Percent_Identity=27.6960784313726, Blast_Score=120, Evalue=2e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002938
- InterPro:   IPR003042 [H]

Pfam domain/function: PF01494 FAD_binding_3 [H]

EC number: 1.5.5.-

Molecular weight: Translated: 45893; Mature: 45761

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAVSAPVERKVTREKISFLTEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMAGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCEECCEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSANSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC
>Mature Secondary Structure 
SDDKFDAIVVGAGVAGSVAALVMARAGLDVLVIERGDSAGCKNMTGGRLYAHTLEAIIP
CCCCEEEEEEECCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
GFAVSAPVERKVTREKISFLTEESAVTLDFHRGQPDVPQHASYTVLRNRLDPWLMEQAEQ
CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHCCCHHHHHHHHH
AGAQFIPGVRVDALVREGNKVTGVQAGDDILEANVVILADGVNSMLGRSLGMVPASDPHH
CCHHCCCCCHHHHHHHCCCEEECCCCCCCCEECCEEEEECCHHHHHHHHCCCCCCCCCCC
YAVGVKEVIGLTPEQINDRFNITGEEGAAWLFAGSPSDGLMAGGFLYTNKDSISLGLVCG
CCCCHHHHHCCCHHHCCCCEEECCCCCCEEEEECCCCCCCEECCEEEECCCCCEEEEEEC
LGDIAHAQKSVPQMLEDFKQHPAIRPLISGGKLLEYSAHMVPEGGLAMVPQLVNEGVMIV
CCHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEHHHCCCCCCHHHHHHHHCCCEEEE
GDAAGFCLNLGFTVRGMDLAIASAQAAATTVIAAKERADFSANSLAQYKRELEQSCVMRD
ECCCCEEEECCEEEECCCEEEHHHHHHHHHHEEEHHHCCCCHHHHHHHHHHHHHHHHHHH
MQHFRKIPALMENPRLFSQYPRMVADIMNEMFTIDGKPNQPVRKMIMGHAKKIGLINLLK
HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHH
DGIKGATAL
HCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]