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The map label for this gene is ydiT

Identifier: 30063033

GI number: 30063033

Start: 1602410

End: 1602703

Strand: Reverse

Name: ydiT

Synonym: S1648

Alternate gene names: 30063033

Gene position: 1602703-1602410 (Counterclockwise)

Preceding gene: 30063034

Following gene: 30063032

Centisome position: 34.85

GC content: 47.96

Gene sequence:

>294_bases
ATGAGCCAGAACGCTACGGTTAACGTCGACATCAAATTAGGCGTCAATAAATTCCATGTTGATGAGGGCCACCCGCATAT
CATTCTGACGGAAAATCCCGATATCAATGAATTCCGTAAATTAATGAAAGCCTGCCCTGCCGGACTTTATAAGCAGGATG
ACGTAGGAAACATTCATTTTGATCCCGCCGGTTGTCTGGAGTGCGGCACCTGTCGGGTGCTGTGCGGTAACACTATTCTC
GAACAGTGGCAATATCCCGCAGGCACCTTCGGTATTGATTTTCGCTACGGCTAA

Upstream 100 bases:

>100_bases
GCAAACCAAACCAGCCGGTACGCAAAATGATCATGGGACACGCGAAGAAAATTGGGCTGATCAACTTGCTGAAAGATGGC
ATTAAGGGAGCAACCGCGCT

Downstream 100 bases:

>100_bases
TCATGCATCCCACAGGCCCGCAACTCGGGCCTGATGTTCTGTTTCGAGAGTCCAAAATGAAAGTGACATTAACGTTTAAC
GAACAACGTCGTGCGGCGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 97; Mature: 96

Protein sequence:

>97_residues
MSQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKACPAGLYKQDDVGNIHFDPAGCLECGTCRVLCGNTIL
EQWQYPAGTFGIDFRYG

Sequences:

>Translated_97_residues
MSQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKACPAGLYKQDDVGNIHFDPAGCLECGTCRVLCGNTIL
EQWQYPAGTFGIDFRYG
>Mature_96_residues
SQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKACPAGLYKQDDVGNIHFDPAGCLECGTCRVLCGNTILE
QWQYPAGTFGIDFRYG

Specific function: Could be a 3Fe-4S cluster-containing protein. Probably participates in a redox process with ydiQ, ydiR and ydiS [H]

COG id: COG2440

COG function: function code C; Ferredoxin-like protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial-type ferredoxin family. FixX subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787992, Length=97, Percent_Identity=95.8762886597938, Blast_Score=198, Evalue=5e-53,
Organism=Escherichia coli, GI1786228, Length=94, Percent_Identity=61.7021276595745, Blast_Score=131, Evalue=6e-33,
Organism=Escherichia coli, GI87082156, Length=87, Percent_Identity=40.2298850574713, Blast_Score=82, Evalue=9e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017900
- InterPro:   IPR012206 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10811; Mature: 10680

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
5.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKACPAGLYKQDDVGNIHF
CCCCCEEEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
DPAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG
CCCCCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECC
>Mature Secondary Structure 
SQNATVNVDIKLGVNKFHVDEGHPHIILTENPDINEFRKLMKACPAGLYKQDDVGNIHF
CCCCEEEEEEEECCEEEEECCCCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCEEEE
DPAGCLECGTCRVLCGNTILEQWQYPAGTFGIDFRYG
CCCCCCCCCCEEEEECCHHHHHCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]