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The map label for this gene is ydjX

Identifier: 30062985

GI number: 30062985

Start: 1549726

End: 1550436

Strand: Reverse

Name: ydjX

Synonym: S1593

Alternate gene names: 30062985

Gene position: 1550436-1549726 (Counterclockwise)

Preceding gene: 30062986

Following gene: 30062984

Centisome position: 33.71

GC content: 48.52

Gene sequence:

>711_bases
ATGAACGCTGAGCGTAACTTTCTGTTTGCCTGTCTTATTTTTGCGCTGGTCATTTACGCTATCCACGCTTTCGGTTTATT
CGATCTGCTCACCGATTTACCCCACTTACAGACACTCATTCGCCAGAGCGGATTGTTCGGTTATAGCCTCTATATTCTGT
TATTCATCAATGCCCCCCTCTTTCTGTTACCAGGAAGCATACTGGTGATCGCTGGAGGAATAGTTTTTGGCCCGCTCTTA
GGGACACAACTCTCATTAATTGCCGCAACGCTGGCCTCCTCGTGCTCATTCCTGCTGGCGCGCTGGCTGGGACGTGATTT
ACTGCTGAAATACGTGGGCCATAGCCATACCTTCCAGGCCATTGAAAAAGGCATTGCGCGTAACGGTATTGATTTTCTTA
TTCTGACCCGCTTAATCCCGTTGTTTCCTTACAATATTCAAAATTACGCTTACGGATTCACCACCATCGCCTTCTGGCCT
TATACCCTTATTTCGGCACTCACGACCCTGCCCGGTATTGTTATTTATACCGTGATGGCAAGCGATCTCGCCAATGAAGG
CATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCATCCAGCTCGCAAAACTCTACG
CCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAG

Upstream 100 bases:

>100_bases
AGTAATGATTTGTTGCCTGCCGTCCTTTGTTATACCGTCACTGCGTTTTTAGTTGTCTGACCACTTCTCTATTATCAAGT
TTGATATAGGAAACTCCACG

Downstream 100 bases:

>100_bases
AACGATGTCGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGCTTACTGGCTGTTGCCGGGCTTAGCG
GCTGCGATCAAAAAGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFINAPLFLLPGSILVIAGGIVFGPLL
GTQLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWP
YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKHVDLSASRRSPLTHPKNEG

Sequences:

>Translated_236_residues
MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFINAPLFLLPGSILVIAGGIVFGPLL
GTQLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWP
YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKHVDLSASRRSPLTHPKNEG
>Mature_236_residues
MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFINAPLFLLPGSILVIAGGIVFGPLL
GTQLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQAIEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWP
YTLISALTTLPGIVIYTVMASDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKHVDLSASRRSPLTHPKNEG

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=236, Percent_Identity=96.1864406779661, Blast_Score=447, Evalue=1e-127,
Organism=Escherichia coli, GI1788049, Length=208, Percent_Identity=25.9615384615385, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 26127; Mature: 26127

Theoretical pI: Translated: 9.31; Mature: 9.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFINAPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCH
FLLPGSILVIAGGIVFGPLLGTQLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWPYTLISALTTLPGIVIYTVMA
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKHVDLSASRRSPLTHPKNEG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MNAERNFLFACLIFALVIYAIHAFGLFDLLTDLPHLQTLIRQSGLFGYSLYILLFINAPL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHCCCH
FLLPGSILVIAGGIVFGPLLGTQLSLIAATLASSCSFLLARWLGRDLLLKYVGHSHTFQA
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
IEKGIARNGIDFLILTRLIPLFPYNIQNYAYGFTTIAFWPYTLISALTTLPGIVIYTVMA
HHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SDLANEGITLRFILQLCLAGLALFILIQLAKLYARHKHVDLSASRRSPLTHPKNEG
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]