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The map label for this gene is ydjY

Identifier: 30062984

GI number: 30062984

Start: 1549044

End: 1549883

Strand: Reverse

Name: ydjY

Synonym: S1592

Alternate gene names: 30062984

Gene position: 1549883-1549044 (Counterclockwise)

Preceding gene: 30062985

Following gene: 30062983

Centisome position: 33.7

GC content: 49.52

Gene sequence:

>840_bases
ATGAAGGCATTACGCTGCGCTTTATTTTACAACTCTGTCTGGCGGGCCTGGCGCTGTTTATTCTCATCCAGCTCGCAAAA
CTCTACGCCCGACACAAACATGTGGATCTGTCTGCTTCGCGCCGCAGCCCACTTACTCACCCAAAAAATGAAGGATAGAA
CGATGTCGCAACATTATTCAGTGTCATGGAAAAAAGGACTGGCTGCACTCTGCTTACTGGCTGTTGCCGGGCTTAGCGGC
TGCGATCAAAAAGAGAATGCGGCGGCAAAAGTGGAATACGACGGACTTTCGAACAGCCAACCGCTGCGCGTCGATGCCAA
TAACCATACGGTAACCATGCTGGTGCAAATTAATGGTCGTTTCCTCACCGACGACACTCGTCACGGTATTGTGTTTAAAG
ATGGCTCCAACGGACATAAATCGCTGTTTATGGCTTATGCGCCCCCGAAAGCATTTTATGAAGCCCTGAAAGAGGCAGGT
GGTACGCCGGGCGAAAACATGACGATGGATAATAAAGAAACGACTCATGTCACAGGCAGCAAACTGGATATTTCGGTCAA
CTGGCAAGGGGCGGCAAAAGCGTATTCCTTCGATGAAGTGATTGTTGACAGTAATGGCAAGAAACTGGACATGCGCTTTG
GCGGTAATTTAACGGCAGCAGAAGAGAAGAAAACGGGTTGCCTGGTGTGTCTGGATAGCTGCCCGGTCGGCATCGTCAGC
AATGCAACATACACTTATGGTGCGGTGGAAAAACACGGCGAAGTGAAATTCAAAGGCAATGCCTCAGTTCTCCCGGCGGA
TAACACGCTGGCAACGGTTACCTTTAAAATCACCGAATAA

Upstream 100 bases:

>100_bases
GGATTCACCACCATCGCCTTCTGGCCTTATACCCTTATTTCGGCACTCACGACCCTGCCCGGTATTGTTATTTATACCGT
GATGGCAAGCGATCTCGCCA

Downstream 100 bases:

>100_bases
AGCCAAGATAAAGGATGATGAAGATACAATCGCGTAAAATCTGGTACTACCGTATAACCCTCATCATCCTGTTGTTCGCT
ATGCTGCTCGCATGGGCGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAHLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSG
CDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAG
GTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVS
NATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFKITE

Sequences:

>Translated_279_residues
MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAHLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSG
CDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAG
GTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVS
NATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFKITE
>Mature_279_residues
MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAHLLTQKMKDRTMSQHYSVSWKKGLAALCLLAVAGLSG
CDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGRFLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAG
GTPGENMTMDNKETTHVTGSKLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVS
NATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFKITE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Escherichia coli, GI87081965, Length=225, Percent_Identity=97.3333333333333, Blast_Score=425, Evalue=1e-120,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30426; Mature: 30426

Theoretical pI: Translated: 8.39; Mature: 8.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAHLLTQKMKDRTMSQHYS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGR
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEECCE
FLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAGGTPGENMTMDNKETTHVTGS
EECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCC
KLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVS
EEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCEEC
NATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFKITE
CCEEEECCEECCCCEEECCCCEEEECCCCEEEEEEEEEC
>Mature Secondary Structure
MKALRCALFYNSVWRAWRCLFSSSSQNSTPDTNMWICLLRAAAHLLTQKMKDRTMSQHYS
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
VSWKKGLAALCLLAVAGLSGCDQKENAAAKVEYDGLSNSQPLRVDANNHTVTMLVQINGR
CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEECCE
FLTDDTRHGIVFKDGSNGHKSLFMAYAPPKAFYEALKEAGGTPGENMTMDNKETTHVTGS
EECCCCCCCEEEECCCCCCEEEEEEECCHHHHHHHHHHCCCCCCCCCEECCCCCEEECCC
KLDISVNWQGAAKAYSFDEVIVDSNGKKLDMRFGGNLTAAEEKKTGCLVCLDSCPVGIVS
EEEEEEECCCCCCEEECCEEEECCCCCEEEEEECCCEEECCCCCCCEEEEECCCCCCEEC
NATYTYGAVEKHGEVKFKGNASVLPADNTLATVTFKITE
CCEEEECCEECCCCEEECCCCEEEECCCCEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]