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The map label for this gene is 30062862

Identifier: 30062862

GI number: 30062862

Start: 1403393

End: 1403659

Strand: Reverse

Name: 30062862

Synonym: S1440

Alternate gene names: NA

Gene position: 1403659-1403393 (Counterclockwise)

Preceding gene: 30062863

Following gene: 30062860

Centisome position: 30.52

GC content: 57.68

Gene sequence:

>267_bases
ATGGTGAGGTACTTCGGGTTCCTTGCCAACCGGGTGTGTGGAGAGAAGCTGCCGCAGGTGTACCGTGCTCTGGGGATGGA
TAAACCGGAACCAGTGGCGAAAGTGTGCTATGCACAAATGGTGAAACAGTTCCTGAGTCGTGACCCGTTCGAATGCGTGC
TGTGTGGCGGCCGGATGGTATACCGCCGGGCCATCGCGGGACTGAATGTGGAGGGGCTGAAGAAAAACGCGCGGGATATC
AGTCTGCTGAGGTATATGCCGGCCTGA

Upstream 100 bases:

>100_bases
TTACCTGGACCACAAAACGGGAGAAACGGCGACGGAAACGCTGACACAGCGTGAGCTGGTCGCGAGGCTGAAACAGCACA
TCCCGGAGAAGTTTTTTAAG

Downstream 100 bases:

>100_bases
CACAGGCTAAGTGTGCCCGGGAATCGGTGCAAGTATAAAAAACAGCCTGTTGCGGTATAAGAATCGACCATGCAGAGAGA
GAAAACACCGGAGTGGAGGG

Product: IS1294 transposase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDI
SLLRYMPA

Sequences:

>Translated_88_residues
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDI
SLLRYMPA
>Mature_88_residues
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMVYRRAIAGLNVEGLKKNARDI
SLLRYMPA

Specific function: Involved in the transposition of the insertion sequence [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 32 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007069 [H]

Pfam domain/function: PF04986 Transposase_32 [H]

EC number: NA

Molecular weight: Translated: 10019; Mature: 10019

Theoretical pI: Translated: 10.02; Mature: 10.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
10.2 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
5.7 %Met     (Mature Protein)
10.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
YRRAIAGLNVEGLKKNARDISLLRYMPA
HHHHHHCCCHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MVRYFGFLANRVCGEKLPQVYRALGMDKPEPVAKVCYAQMVKQFLSRDPFECVLCGGRMV
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCHHH
YRRAIAGLNVEGLKKNARDISLLRYMPA
HHHHHHCCCHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1646375 [H]