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The map label for this gene is ycgG [H]

Identifier: 30062686

GI number: 30062686

Start: 1201348

End: 1202871

Strand: Direct

Name: ycgG [H]

Synonym: S1241

Alternate gene names: 30062686

Gene position: 1201348-1202871 (Clockwise)

Preceding gene: 30062683

Following gene: 30062687

Centisome position: 26.12

GC content: 45.08

Gene sequence:

>1524_bases
ATGCGCAATACACTCATACCCATCCTCGTTGCGATATGCTTGTTTATTACCGGTGTCGCTATTTTGAACATCCAGCTCTG
GTATTCCGCAAAAGCAGAGTACCTGGCGGGAGCAAGATATGCCGCCAACAATATCAATCATATACTTGAAGAAGCGTCAC
AGGCGACTCAAACAGCGGTTAACATTGCCGGGAAGGAATGCGACCTCGAGGAGCAATATCAGCTTGGCACTGAAGCAGCT
CTGAAACCTCACCTGCGCACAATCATCATTCTCAAACAGGGAATAGTCTGGTGTACATCCCTGCCTGGGAATCGGGTCCT
GCTGTCTCGTATTCCTGTTGTCCCGGACAGTAATTTACTGTTGGCTCCGGCAATCGACACCGTTAATAGATTACCTATCC
TGCTCTATCAGAGCCAATTTGCAGATACGCGCATTTTGGTTACGATAAGTGATCAACATATTCGCGGGGCGCTTAATGTA
CCCTTGAAAGGGGTAAGGTATGTATTACGCGTGGCGGATGACATTATTGGACCAACGGCTGATGTGATGACGCTTAATGG
ACATTATCCCTATACCGAGAAGGTTCACTCCACAAAATATCATTTCACTATTATCTTTAACCCGCCGCCACTCTTTAGCT
TCTACAGACTTATCGATAAAGGCTTTGGGATTTTAATATTTATTCTGTTAATCGCCAGCGCCGCTGCCTTCCTGCTTGAT
AGATATTTCAATAAAAGCGCAACGCCTGAAGAGATCCTGCGACGGGCAATAAATAATGGGGAGATCGTCCCTTTTTACCA
ACCTGTGGTAAATGGTCGGGAAGGGACATTGCGGGGAGTTGAGGTGTTAGCCCGCTGGAAACAACCTCACGGTGGATATA
TTTCACCCGCGGCATTTATTCCACTTGCTGAAAAATCCGGATTAATCGTTCCGCTTACACAAAGCCTGATGAATCAGGTT
GCCAGACAGATGAACGCTATCGCGAGTAAACTGCCGGAAGGTTTTCATATTGGAATTAATTTTAGCGCTTCGCATATTAT
TTCGCCGACGTTTGTCGACGAGTGTTTAAATTTCCGTGACAGTTTTACCCGCCGCGATTTAAACCTTGTTCTGGAAGTCA
CCGAGCGTGAGCCATTGAATGTTGATGAAAGTCTGGTTCAGCGGTTGAACATTCTGCATGAAAATGGTTTTGTCATCGCG
CTGGATGATTTCGGTACTGGCTACTCAGGGCTTTCTTATCTTCATGACCTGCATATTGATTATATCAAAATTGATCACAG
TTTCGTTGGCCGCGTAAACGCAGACCCAGAATCAACCCGAATTCTGGATTGTGTATTGGATCTGGCGCGTAAACTTTCGA
TCAGTATCGTCGCTGAAGGTGTCGAAACGAAAGAACAACTTGGCTATCTGAACCAAAATAATATCACATTTCAGCAGGGT
TATTATTTCTATAAACCTGTTACATACATCGACCTGGTCAAAATTATCCTTTCTAAACCGAAGGTGAAGGTTGTGGTTGA
GTGA

Upstream 100 bases:

>100_bases
AAGCCACGCAAGCACCTTAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATTACCCATTTTCATGTATTAAAC
CCTTTGGCCGGGACAAGCAA

Downstream 100 bases:

>100_bases
AAATTGATCAGTAAGGCCATAGTGCGGTGTAATTATAGACAGCTAATTAGCTCGTTGCCTCTTGTTACTATTGTTCATTA
TTTTGTTTGCTATAATTGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 507; Mature: 507

Protein sequence:

>507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTADVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIASAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLGYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Sequences:

>Translated_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTADVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIASAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLGYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE
>Mature_507_residues
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAVNIAGKECDLEEQYQLGTEAA
LKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVVPDSNLLLAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNV
PLKGVRYVLRVADDIIGPTADVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIASAAAFLLD
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFIPLAEKSGLIVPLTQSLMNQV
ARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRDSFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIA
LDDFGTGYSGLSYLHDLHIDYIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLGYLNQNNITFQQG
YYFYKPVTYIDLVKIILSKPKVKVVVE

Specific function: Unknown

COG id: COG2200

COG function: function code T; FOG: EAL domain

Gene ontology:

Cell location: Cytoplasm (Potential). Note=Found associated with the RNA degradosome [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 EAL domain [H]

Homologues:

Organism=Escherichia coli, GI87081845, Length=507, Percent_Identity=98.6193293885602, Blast_Score=1020, Evalue=0.0,
Organism=Escherichia coli, GI1786507, Length=275, Percent_Identity=41.4545454545455, Blast_Score=205, Evalue=6e-54,
Organism=Escherichia coli, GI1788502, Length=252, Percent_Identity=39.2857142857143, Blast_Score=180, Evalue=2e-46,
Organism=Escherichia coli, GI87081980, Length=534, Percent_Identity=27.7153558052434, Blast_Score=165, Evalue=8e-42,
Organism=Escherichia coli, GI87081743, Length=295, Percent_Identity=34.5762711864407, Blast_Score=159, Evalue=4e-40,
Organism=Escherichia coli, GI87081921, Length=238, Percent_Identity=34.8739495798319, Blast_Score=147, Evalue=2e-36,
Organism=Escherichia coli, GI1790496, Length=279, Percent_Identity=31.5412186379928, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1787541, Length=235, Percent_Identity=34.0425531914894, Blast_Score=135, Evalue=7e-33,
Organism=Escherichia coli, GI226510982, Length=250, Percent_Identity=30.8, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1787055, Length=239, Percent_Identity=29.2887029288703, Blast_Score=107, Evalue=1e-24,
Organism=Escherichia coli, GI87082096, Length=235, Percent_Identity=29.7872340425532, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1788849, Length=258, Percent_Identity=28.6821705426357, Blast_Score=96, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001633 [H]

Pfam domain/function: PF00563 EAL [H]

EC number: NA

Molecular weight: Translated: 56723; Mature: 56723

Theoretical pI: Translated: 7.00; Mature: 7.00

Prosite motif: PS50883 EAL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVVPDSNLL
HHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTA
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIASAAAFLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLGYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHCCCCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC
>Mature Secondary Structure
MRNTLIPILVAICLFITGVAILNIQLWYSAKAEYLAGARYAANNINHILEEASQATQTAV
CCCCHHHHHHHHHHHHHHHHHEEEEEEECCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
NIAGKECDLEEQYQLGTEAALKPHLRTIIILKQGIVWCTSLPGNRVLLSRIPVVPDSNLL
HHCCCCCCCHHHHHCCCHHHHCCHHHEEEEEECCCEEEECCCCCEEEEEECCCCCCCCEE
LAPAIDTVNRLPILLYQSQFADTRILVTISDQHIRGALNVPLKGVRYVLRVADDIIGPTA
EECCHHHHCCCEEEEEECCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC
DVMTLNGHYPYTEKVHSTKYHFTIIFNPPPLFSFYRLIDKGFGILIFILLIASAAAFLLD
CEEEECCCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
RYFNKSATPEEILRRAINNGEIVPFYQPVVNGREGTLRGVEVLARWKQPHGGYISPAAFI
HHHCCCCCHHHHHHHHCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCHHEE
PLAEKSGLIVPLTQSLMNQVARQMNAIASKLPEGFHIGINFSASHIISPTFVDECLNFRD
EECCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHCCCHHHHHHHHHHHH
SFTRRDLNLVLEVTEREPLNVDESLVQRLNILHENGFVIALDDFGTGYSGLSYLHDLHID
HHHHCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCEE
YIKIDHSFVGRVNADPESTRILDCVLDLARKLSISIVAEGVETKEQLGYLNQNNITFQQG
EEEECCHHCCCCCCCCCHHHHHHHHHHHHHHHEEEEEECCCCHHHHCCCCCCCCEEEECC
YYFYKPVTYIDLVKIILSKPKVKVVVE
EEEECCHHHHHHHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]