Click here to switch to the map view.

The map label for this gene is yuaQ [H]

Identifier: 30062687

GI number: 30062687

Start: 1203948

End: 1206269

Strand: Direct

Name: yuaQ [H]

Synonym: S1242

Alternate gene names: 30062687

Gene position: 1203948-1206269 (Clockwise)

Preceding gene: 30062686

Following gene: 30062690

Centisome position: 26.18

GC content: 47.24

Gene sequence:

>2322_bases
TTGCAGGGTAAAAACACGATTGTCACAACGGGGGATTACTCAATTGGTTTGCTAAGTCAAACGAGTGGAAACCTGAATAC
TGACACCATAATAAGAGTCAACTCTGACGGTTCGGTTACCCCCTCTTTTTCTGACGGAGATGATACATTTATTGTTACTG
CGGGTAATCACGCAGTCGGCGTTCTTGCGTGTGCATCTCCCGGAAGCGCGTGTGCGTGTGTATCTTCTCTTGATGAAGAA
AGTACTGCCGATACAGGAAGTAATGAAAATAATGCCATAGCAAAACTGGATATGGCAAAAGGGGAGATCACAACCCACGG
AACAGAAAGTTATGCCGCGTACGCTAATGGCACTGTCGTCAAGGCTGGTGACACGCTTGATTATACCAATGCCAGCGTTA
CATTAACCGATGTTGATATCACCACGCATGGGGACAATGCTCATGCCATCGCTGCCCGCCAGGGGACAGTTTCATTTAAC
CAGGGAGAAATTTATACAACGGGTCCTGACGCCGCGATTGCTAAAATTTATAATGGCGGCACGGTGACGCTGAAAAATAC
ATCTGCAGTCGCGCATCAGGGGTCTGGAATTGTGCTGGAGTCTTCCATAAATGGTCAGGAAGCAACGGTAGATATTTTAT
CTGGTAGCTCACTACGGTCAGCAAATGAAATCCTCTACCATAAAGATGAGACGAGTAACGTGACCATTACGGATAGTGAG
GTATCATCGGCTGCAGATGTTTTTATCAATAATATTAAAGGTCATTTGACCGTCGATGCAACTAATTCAAAAATAACGGG
TTCAGCTAATATTTCAACAGATGATAACACTCATACCTATCTGTCGCTTTCAGATAATAGTACCTGGGATATTAAAGCTG
ACTCAACGGTGAGCAACCTCACGGTTGATAATAGTACGGTCTATATTTCCCGGGCAGATGGACGGGATGTCGAACCAACA
AGATTAACAATAACTGAAAATTACGTTGGTAATAATGGCGTATTGCATCTCAGAACTGAATTGGATGATGATAATTCAGC
TACGGATAAAGTCGTTATTAATGGAAATACCTCTGGAACAACCCGAGTTAAAGTTACCAATGCAGGAGGCAGCGGAGCTT
ACACGTTAAATGGGATAGAGATTATCAGCGTTGAGGGGGAATCAAATGGGGAATTTATTAAGGATTCGAGGATTTTCGCC
GGTGCCTACGAATATTCATTAACCCGAGGTAATACCGAAGCGACCAATAAAAACTGGTATCTGACTAACTTCCAGGCAAC
GAGCGGCGGTGAAACAAACTCCGGAGGAAGTTCAGCGCCTACTGTTGCGCCTACCCCCGTCCTGCGCCCCGAAGCTGGAA
GTTACGTCGCCAACCTGGCAGCCGCTAACACTCTTTTTGTTATGCGTCTGAACGACCGTGCGGGTGAAACGCGCTACATC
GATCCTGTAACTGAACAGGAGCGTTCAAGCCGACTTTGGCTACGTCAAATTGGCGGGCATAATGCCTGGCGTGACAGCAA
CGGACAGTTGAGAACGACCTCGCATCGCTACGTCTCGCAGTTAGGGGGCGATCTGTTAACCGGTGGTTTTACCGATAGTG
ACAGTTGGCGTTTGGGAGTGATGGCTGGTTATGCCCGCGACTACAACTTAACTCATTCCAGCGTGTCGGATTATCGTTCG
AAAGGGAGTGTCAGAGGCTATAGCGCAGGGCTGTATGCCACTTGGTTTGCCGATGACATCAGTAAAAAAGGCGCATACAT
TGACTCCTGGGCGCAATATAGCTGGTTTAAAAACTCCGTGAAAGGGGATGAATTAGCCTATGAATCCTATAGCGCGAAAG
GTGCAACCGTCTCGCTGGAAGCGGGTTACGGTTTTGCCCTGAATAAATCCTTTGGTCTGGAAGCGGCGAAATATACGTGG
ATCTTCCAGCCACAGGCACAGGCTATCTGGATGGGCGTCGATCATAATGCGCACACGGAAGCCAATGGCTCACGTATTGA
GAATGACGCAAATAACAACATCCAGACCCGACTCGGCTTCCGCACCTTTATTCGTACTCAGGAGAAAAACAGCGGTCCGC
ACGGTGACGACTTTGAACCTTTTGTTGAAATGAACTGGATCCATAACAGTAAAGATTTTGCTGTCTCAATGAACGGTGTG
AAAGTCGAACAAGATGGGGTGAGTAATTTGGGGGAAATTAAACTTGGCGTAAATGGCAACCTGAATCCAGCGGCCAGCGT
CTGGGGGAATGTGGGCGTGCAGCTGGGTGATAATGGCTACAATGACACCGCAGTGATGGTGGGCCTGAAATATAAGTTCT
GA

Upstream 100 bases:

>100_bases
CATTGTAACAACGGGCGGTTTATATCCTTCTGACAATAGTCCTCTAAGCCCAGCATTAACAGCTAGCGCAATCGTAAGTG
AATTTGGCGGTGCTGTTATT

Downstream 100 bases:

>100_bases
TCCCGCCGTTAGCTAAAAAACCGCGTCGTATTCATCGACGCGGTACATATGAAATATTATTTTTTGCCGATAGCACGCAT
GGTGTCATCAATTGCCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 773; Mature: 773

Protein sequence:

>773_residues
MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSACACVSSLDEE
STADTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIYTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKDETSNVTITDSE
VSSAADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPT
RLTITENYVGNNGVLHLRTELDDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGVMAGYARDYNLTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDSWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGVSNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF

Sequences:

>Translated_773_residues
MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSACACVSSLDEE
STADTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIYTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKDETSNVTITDSE
VSSAADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPT
RLTITENYVGNNGVLHLRTELDDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGVMAGYARDYNLTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDSWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGVSNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
>Mature_773_residues
MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVGVLACASPGSACACVSSLDEE
STADTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVVKAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFN
QGEIYTTGPDAAIAKIYNGGTVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKDETSNVTITDSE
VSSAADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNLTVDNSTVYISRADGRDVEPT
RLTITENYVGNNGVLHLRTELDDDNSATDKVVINGNTSGTTRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFA
GAYEYSLTRGNTEATNKNWYLTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGVMAGYARDYNLTHSSVSDYRS
KGSVRGYSAGLYATWFADDISKKGAYIDSWAQYSWFKNSVKGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTW
IFQPQAQAIWMGVDHNAHTEANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
KVEQDGVSNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF

Specific function: Unknown

COG id: COG3468

COG function: function code MU; Type V secretory pathway, adhesin AidA

Gene ontology:

Cell location: Cell outer membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 autotransporter (TC 1.B.12) domain [H]

Homologues:

Organism=Escherichia coli, GI1788565, Length=588, Percent_Identity=30.2721088435374, Blast_Score=205, Evalue=1e-53,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005546
- InterPro:   IPR013425
- InterPro:   IPR006315
- InterPro:   IPR012332
- InterPro:   IPR011050
- InterPro:   IPR004899 [H]

Pfam domain/function: PF03797 Autotransporter; PF03212 Pertactin [H]

EC number: NA

Molecular weight: Translated: 82450; Mature: 82450

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVG
CCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEE
VLACASPGSACACVSSLDEESTADTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVV
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEECCCEEE
KAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIYTTGPDAAIAKIYNGG
ECCCCEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCC
TVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKDETSNVTITDSE
EEEEECCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECHH
VSSAADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNL
HCHHHHHEEECCCEEEEEEECCCEEEECEECCCCCCCEEEEEECCCCEEEEEECCCEEEE
TVDNSTVYISRADGRDVEPTRLTITENYVGNNGVLHLRTELDDDNSATDKVVINGNTSGT
EECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCE
TRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWY
EEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEE
LTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCEEEE
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCEEECCCCCCCCEEEEE
MAGYARDYNLTHSSVSDYRSKGSVRGYSAGLYATWFADDISKKGAYIDSWAQYSWFKNSV
EEECCCCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHHCCCCEEECHHHHHHHHCCC
KGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTE
CCCCEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCC
ANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
CCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCE
KVEQDGVSNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
EEECCCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCCCEEEEEEEEECC
>Mature Secondary Structure
MQGKNTIVTTGDYSIGLLSQTSGNLNTDTIIRVNSDGSVTPSFSDGDDTFIVTAGNHAVG
CCCCCEEEEECCCEEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCEEE
VLACASPGSACACVSSLDEESTADTGSNENNAIAKLDMAKGEITTHGTESYAAYANGTVV
EEEECCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEEEECCCEEEECCCCCEEEECCCEEE
KAGDTLDYTNASVTLTDVDITTHGDNAHAIAARQGTVSFNQGEIYTTGPDAAIAKIYNGG
ECCCCEEECCCEEEEEEEEEEECCCCCEEEEEECCEEEECCCEEEECCCCCEEEEEECCC
TVTLKNTSAVAHQGSGIVLESSINGQEATVDILSGSSLRSANEILYHKDETSNVTITDSE
EEEEECCCEEEECCCCEEEEECCCCCEEEEEEECCCCCCCCCEEEEECCCCCEEEEECHH
VSSAADVFINNIKGHLTVDATNSKITGSANISTDDNTHTYLSLSDNSTWDIKADSTVSNL
HCHHHHHEEECCCEEEEEEECCCEEEECEECCCCCCCEEEEEECCCCEEEEEECCCEEEE
TVDNSTVYISRADGRDVEPTRLTITENYVGNNGVLHLRTELDDDNSATDKVVINGNTSGT
EECCCEEEEECCCCCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCEEEEECCCCCE
TRVKVTNAGGSGAYTLNGIEIISVEGESNGEFIKDSRIFAGAYEYSLTRGNTEATNKNWY
EEEEEEECCCCCEEEECCEEEEEEECCCCCCEEECCEEEEEEEEEEEECCCCCCCCCCEE
LTNFQATSGGETNSGGSSAPTVAPTPVLRPEAGSYVANLAAANTLFVMRLNDRAGETRYI
EEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCEEEEEEECCCCCCEEEE
DPVTEQERSSRLWLRQIGGHNAWRDSNGQLRTTSHRYVSQLGGDLLTGGFTDSDSWRLGV
CCCCHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHCCCEEECCCCCCCCEEEEE
MAGYARDYNLTHSSVSDYRSKGSVRGYSAGLYATWFADDISKKGAYIDSWAQYSWFKNSV
EEECCCCCCCCCCHHHHHHHCCCCCEEECCEEEEEEHHHHHCCCCEEECHHHHHHHHCCC
KGDELAYESYSAKGATVSLEAGYGFALNKSFGLEAAKYTWIFQPQAQAIWMGVDHNAHTE
CCCCEEEECCCCCCCEEEEECCCCEEECCCCCCCEEEEEEEECCCCEEEEEECCCCCCCC
ANGSRIENDANNNIQTRLGFRTFIRTQEKNSGPHGDDFEPFVEMNWIHNSKDFAVSMNGV
CCCCCCCCCCCCCEEEEECEEEEEEECCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCE
KVEQDGVSNLGEIKLGVNGNLNPAASVWGNVGVQLGDNGYNDTAVMVGLKYKF
EEECCCCCCCCEEEEECCCCCCHHHHHHCCCCEEECCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA