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The map label for this gene is 30062673

Identifier: 30062673

GI number: 30062673

Start: 1189345

End: 1189656

Strand: Direct

Name: 30062673

Synonym: S1227

Alternate gene names: NA

Gene position: 1189345-1189656 (Clockwise)

Preceding gene: 30062672

Following gene: 30062674

Centisome position: 25.86

GC content: 54.81

Gene sequence:

>312_bases
GTGAAGCAGTGGCGGGAAAAATCGCGGCAGCTTGCGGAACGGGGAGACCTGACCCCCGCCGACTGGAGCAATCTGGAACT
GTATTGCGTCAACTACTCCATTTACCGGAAAGCCGTTGCAGACCTTGCGGCGCGCGGGTTCAGCATTGTTAACAGTCAGG
GCGGCGAGAGCAGAAACCCCGCATTAAGCGCAAAATCCGACGCTGAAAGAGTGATGATAAAAATGGCCTCCTTGCTCGGT
TTTGACCCGATAAGCCGCCGTAAAAATCCACCGGAAACAGAAGAAGAGGACGAGCTTGACCGCCTGGAATAA

Upstream 100 bases:

>100_bases
GAGGTTATGGAATGTTTCCGCAATCGCTGATGAGGCTGTATGACGGGGTGGGGGGCGTTTTCAGGACAAACCCGACCCCG
CCTACCTGGATGATATCGCC

Downstream 100 bases:

>100_bases
GTACGCAGAAGACGTAAAAACGGGCAAAATTCCGGCCTGTAAACGGTTAAAACAGGCTGTTAAACGGTACTTTTCGGACC
TTAAAAGCCCCCTTTACACG

Product: hypothetical protein

Products: NA

Alternate protein names: Phage Terminase Small Subunit

Number of amino acids: Translated: 103; Mature: 103

Protein sequence:

>103_residues
MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLG
FDPISRRKNPPETEEEDELDRLE

Sequences:

>Translated_103_residues
MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLG
FDPISRRKNPPETEEEDELDRLE
>Mature_103_residues
MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNPALSAKSDAERVMIKMASLLG
FDPISRRKNPPETEEEDELDRLE

Specific function: Unknown

COG id: COG3747

COG function: function code L; Phage terminase, small subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11718; Mature: 11718

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNP
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCHHHHCCCCCCCCCC
ALSAKSDAERVMIKMASLLGFDPISRRKNPPETEEEDELDRLE
CCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MKQWREKSRQLAERGDLTPADWSNLELYCVNYSIYRKAVADLAARGFSIVNSQGGESRNP
CCHHHHHHHHHHHHCCCCCCCCCCEEEEEECHHHHHHHHHHHHHHCHHHHCCCCCCCCCC
ALSAKSDAERVMIKMASLLGFDPISRRKNPPETEEEDELDRLE
CCCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA