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The map label for this gene is 30062672

Identifier: 30062672

GI number: 30062672

Start: 1188896

End: 1189108

Strand: Direct

Name: 30062672

Synonym: S1226

Alternate gene names: NA

Gene position: 1188896-1189108 (Clockwise)

Preceding gene: 30062671

Following gene: 30062673

Centisome position: 25.85

GC content: 49.3

Gene sequence:

>213_bases
GTGGTGGTGGATCACATTATCCCGATTAATGGCGGTGATGATGTTCTCTTCTGGCCCGAATGGAACCATCAACCATTGTG
CCAGGCGTGTCATAACCAGAAAACGAAATGGCTTGATCCGGCAACAAAAAGCAAGCGTGCCGCAGGTGGATTTCGTGAAG
AGGAAGAACGGGCTGCTAACCGCAATAACTGGATGTATGACGCTGATGAATGA

Upstream 100 bases:

>100_bases
GCGTGGATATTCCAGACAGTGGGACAAATACCGCGCCATGTATCTGAGTAAAAACCCGTTATGCGTGCGATGCCTTGAGA
AGGGGATATATACGCCCGCC

Downstream 100 bases:

>100_bases
GCGGGAACAAAACCGCCTTATCCGTGGACTTATAAGGCAGCGTGACGCATGGAAGACACAGGAAACAGGGCATAAAGATA
AAGCGTCAGGACGCGCAGAA

Product: putative holin protein of prophage CP-933C

Products: NA

Alternate protein names: Holin Protein

Number of amino acids: Translated: 70; Mature: 70

Protein sequence:

>70_residues
MVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE

Sequences:

>Translated_70_residues
MVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE
>Mature_70_residues
MVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAANRNNWMYDADE

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8152; Mature: 8152

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAAN
CCCCCEEECCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
RNNWMYDADE
CCCCEEECCC
>Mature Secondary Structure
MVVDHIIPINGGDDVLFWPEWNHQPLCQACHNQKTKWLDPATKSKRAAGGFREEEERAAN
CCCCCEEECCCCCCEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHCC
RNNWMYDADE
CCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA