| Definition | Shigella flexneri 2a str. 2457T, complete genome. |
|---|---|
| Accession | NC_004741 |
| Length | 4,599,354 |
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The map label for this gene is 30062671
Identifier: 30062671
GI number: 30062671
Start: 1188372
End: 1188668
Strand: Direct
Name: 30062671
Synonym: S1225
Alternate gene names: NA
Gene position: 1188372-1188668 (Clockwise)
Preceding gene: 30062670
Following gene: 30062672
Centisome position: 25.84
GC content: 52.19
Gene sequence:
>297_bases ATGACAGAAGAACTTATCACCCTGGAAGAAGTGAAACTCCATTGCCGCATCGATGGCGACGATGAAGACCAGTTAATCAG CGGATACATTGCCGCATCGCTTGAGGCGTGCCAGATACACATAGGCAGGCGCTTTGATGACGGGCTGGCGTTCACGCCAG CCATAAAGATTGGCTGCATGATGTTTATCGCTCACCTGTATGAAAATCGCCAGATTGTCGCGGATAACGCAAAAACACGC GTACCCATGACGATAGGCGCACTCTGGACGGCTTACCGTGATGTGGGGGGGTACTGA
Upstream 100 bases:
>100_bases CGGGGCCGCTGGCGGGGCGTGTACTGAATATCATCGGGCAGCCGCTGCCGGATGCCGCCAGGACACGCCTTGAAATTCTT TGTCGTGAGGGCGCGGAAAA
Downstream 100 bases:
>100_bases TGCCGTGGCAACCATTAAGACGATGCACAGAACCAGGCTGTAACAGGCGCGTTAAATCCGGCAAGTGTGAGGAGCACAGG CGGGCGGCATGGCGTGCAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 98; Mature: 97
Protein sequence:
>98_residues MTEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCMMFIAHLYENRQIVADNAKTR VPMTIGALWTAYRDVGGY
Sequences:
>Translated_98_residues MTEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCMMFIAHLYENRQIVADNAKTR VPMTIGALWTAYRDVGGY >Mature_97_residues TEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCMMFIAHLYENRQIVADNAKTRV PMTIGALWTAYRDVGGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10992; Mature: 10861
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 7.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCM CCCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCEECHHHHHHHH MFIAHLYENRQIVADNAKTRVPMTIGALWTAYRDVGGY HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure TEELITLEEVKLHCRIDGDDEDQLISGYIAASLEACQIHIGRRFDDGLAFTPAIKIGCM CCCCEEHHHEEEEEEECCCCCHHHHHHHHHHHHEEEEEEECCCCCCCCEECHHHHHHHH MFIAHLYENRQIVADNAKTRVPMTIGALWTAYRDVGGY HHHHHHHCCCEEEECCCCCCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA