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The map label for this gene is rutC [H]

Identifier: 30062547

GI number: 30062547

Start: 1064065

End: 1064451

Strand: Reverse

Name: rutC [H]

Synonym: S1083

Alternate gene names: 30062547

Gene position: 1064451-1064065 (Counterclockwise)

Preceding gene: 30062548

Following gene: 30062546

Centisome position: 23.14

GC content: 53.75

Gene sequence:

>387_bases
ATGCCAAAATCCGTAATTATTCCCGCTGGCAGCAGCGCACCGCTGGCCCCCTTCGTTCCCGGCACGCTGGCTGATGGCGT
GGTGTATGTCTCCGGTACGCTGGCTTTTGATCAACATAATAACGTGCTGTTTGCCGATGACCCAAAGGCGCAAACCCGCC
ACGTTCTGGAAACTATCCGCAAGGTGATCGAGACGGCGGGTGGCACGATGGCGGATGTGACCTTCAACAGCATCTTTATT
ACCGACTGGAAAAATTACGCCGCGATTAACGAAATCTACGCCGAGTTTTTTCCGGGTGATAAACCGGCGCGATTCTACAT
TCAGTGCGGACTGGTAAAACCTGACGCGCTGGTGGAAATCGCCACAATTGCGCATATCGCCAAGTGA

Upstream 100 bases:

>100_bases
TCAATATCGAAACCTTTTTTGGCTGGGTCAGCGACGTCGAAACGTTCTGCGACGCGCTTTCTCCCACGTCCTTTGCTCGT
ATCGCTTAAGGAGTTTAGCG

Downstream 100 bases:

>100_bases
GGCCGCGATGAAACTTTCACTCTCATCTCCCCCTTATGCTGATGCACCCGTAGTGGTGTTGATTTCGGGTCTTGGCGGTA
GCGGCAGTTACTGGTTACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 127

Protein sequence:

>128_residues
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFI
TDWKNYAAINEIYAEFFPGDKPARFYIQCGLVKPDALVEIATIAHIAK

Sequences:

>Translated_128_residues
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFI
TDWKNYAAINEIYAEFFPGDKPARFYIQCGLVKPDALVEIATIAHIAK
>Mature_127_residues
PKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIRKVIETAGGTMADVTFNSIFIT
DWKNYAAINEIYAEFFPGDKPARFYIQCGLVKPDALVEIATIAHIAK

Specific function: May reduce aminoacrylate peracid to aminoacrylate. Required to remove a toxic intermediate produce by the pyrimidine nitrogen degradation [H]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI1787245, Length=128, Percent_Identity=99.21875, Blast_Score=259, Evalue=3e-71,
Organism=Escherichia coli, GI87082213, Length=125, Percent_Identity=28.8, Blast_Score=59, Evalue=8e-11,
Organism=Drosophila melanogaster, GI19921376, Length=122, Percent_Identity=35.2459016393443, Blast_Score=82, Evalue=9e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR019898
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 13823; Mature: 13692

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: PS01094 UPF0076

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR
CCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHH
KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFYIQCGLVKPDALVEI
HHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH
ATIAHIAK
HHHHHHCC
>Mature Secondary Structure 
PKSVIIPAGSSAPLAPFVPGTLADGVVYVSGTLAFDQHNNVLFADDPKAQTRHVLETIR
CCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCHHHHHHHHHHH
KVIETAGGTMADVTFNSIFITDWKNYAAINEIYAEFFPGDKPARFYIQCGLVKPDALVEI
HHHHHCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHH
ATIAHIAK
HHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA