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The map label for this gene is torT

Identifier: 30062531

GI number: 30062531

Start: 1048125

End: 1049153

Strand: Direct

Name: torT

Synonym: S1064

Alternate gene names: 30062531

Gene position: 1048125-1049153 (Clockwise)

Preceding gene: 30062529

Following gene: 30062533

Centisome position: 22.79

GC content: 53.35

Gene sequence:

>1029_bases
ATGCGCGTACTGCTATTTTTACTTCTTTCCCTTTTCATGTTGTCGGCATTTTCGGCTGATAACCTGTTGCGCTGGCATGA
TGCGCAGCATTTCACGGTGCAAGCCTCTATGCCGCTTAAAGCCAAACGCGTATGGAAACTGTGCGCGCTTTATCCCAGCC
TGAAAGATTCATACTGGTTATCGTTGAACTATGGTATGCAGGAGGCTGCTCGCCGCTACGGTGTGGATTTAAAAGTGCTG
GAGGCAGGCGGCTACAGCCAGTTGGCTACCCAGCAAGCACAAATCGACCAGTGTAAACAGTGGGGCGCAGAGGCCATTTT
GCTCGGTAGTAGCACGACGTCATTTCCCGACCTGCAAAAGCAGGTAGCAAATCTGCCGGTGATCGAACTGGTAAATGCTC
TTGATGATCCCCAGGTGAAAAGCCGCGTTGGTGTACCCTGGTTTCAGATGGGCTATCAACCTGGGCGATATTTGGTGCAA
TGGGCGCACGGTAAACCACTGAACGTGCTGCTGATGCCCGGACCCGATAACGCCGGGGGCAGTAAGGAGATGGTCGAGGG
TTTTCGCGCAGCCATTGCCGGAAGCCCGGTGCGTATTGTTGATATTGCGCTTGGTGATAACGATATTGAAATCCAGCGCA
ACCTGTTGCAGGAGATGCTGGAACGCCACCCAGAAATCGACGTCGTTGCCGGAACGGCCATTGCGGCAGAGGCGGCAATG
GGTGAAGGGCGTAACCTGAAAACGCCGCTTACCGTGGTGTCGTTTTATCTTTCACATCAGGTGTATCGCGGGCTGAAGCG
GGGAAGAGTGATTATGGCTGCCAGCGATCAAATGGTCTGGCAGGGGGAACTGGCAGTTGAGCAGGCCATCAGGCAATTAC
AGGGGCAATCGGTGTCTGATAATGTCAGCCCACCGATTTTAGTTCTGACGCCGAAAAATGCCGACCGAGAACATATCCGC
CGCTCGCTGTCACCGGGGGGATTTCGTCCGGTCTATTTTTATCAGCACACATCAGCGGCTAAGAAATAA

Upstream 100 bases:

>100_bases
GGTCAGGGTTAAATTCACGGTCGGTGCACTTAAGGTGAAAAAGGTTGAGTCGCAAAGTGGAATGCATCTAGCATAAAGCC
TTATTATTGATGAGGCTATC

Downstream 100 bases:

>100_bases
CCTTCACCATGTTGCGTCACCAGTAAATCCGCGCTGAGTTTATGACGTAAACGACGAATTAACACATCGACGGTGCGCAG
GTCAGGGTTTTCCACCCGAC

Product: TMAO reductase system periplasmic protein TorT

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Sequences:

>Translated_342_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK
>Mature_342_residues
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWLSLNYGMQEAARRYGVDLKVL
EAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQKQVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQ
WAHGKPLNVLLMPGPDNAGGSKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSDNVSPPILVLTPKNADREHIR
RSLSPGGFRPVYFYQHTSAAKK

Specific function: Upon binding a putative inducer it probably interacts with torS and allows it to play a role in the induction of the torCAD operon for trimethylamine N-oxide reductase [H]

COG id: COG1879

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787228, Length=342, Percent_Identity=98.2456140350877, Blast_Score=692, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001761
- InterPro:   IPR014301 [H]

Pfam domain/function: PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 37984; Mature: 37984

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC
>Mature Secondary Structure
MRVLLFLLLSLFMLSAFSADNLLRWHDAQHFTVQASMPLKAKRVWKLCALYPSLKDSYWL
CHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCEEE
SLNYGMQEAARRYGVDLKVLEAGGYSQLATQQAQIDQCKQWGAEAILLGSSTTSFPDLQK
EEECCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHH
QVANLPVIELVNALDDPQVKSRVGVPWFQMGYQPGRYLVQWAHGKPLNVLLMPGPDNAGG
HHHCCCHHHHHHHCCCCHHHHHCCCCHHHHCCCCCCEEEEECCCCCEEEEEECCCCCCCC
SKEMVEGFRAAIAGSPVRIVDIALGDNDIEIQRNLLQEMLERHPEIDVVAGTAIAAEAAM
CHHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHH
GEGRNLKTPLTVVSFYLSHQVYRGLKRGRVIMAASDQMVWQGELAVEQAIRQLQGQSVSD
CCCCCCCCHHHHHHHHHHHHHHHHHHHCEEEEEECCCEEECHHHHHHHHHHHHCCCCCCC
NVSPPILVLTPKNADREHIRRSLSPGGFRPVYFYQHTSAAKK
CCCCCEEEEECCCCCHHHHHHHCCCCCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]