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The map label for this gene is ymcE

Identifier: 30062529

GI number: 30062529

Start: 1043714

End: 1043944

Strand: Direct

Name: ymcE

Synonym: S1061

Alternate gene names: 30062529

Gene position: 1043714-1043944 (Clockwise)

Preceding gene: 30062528

Following gene: 30062531

Centisome position: 22.69

GC content: 41.99

Gene sequence:

>231_bases
ATGCGCCGCTGGATTTCACAAAATAATATCAGGCTCCCTCGTGGAGCCTTTTTTATATCTGCCTTATTTTTCTTCAACGC
TGTATGTATAGTAAGCGATAACCTGTTGATTATTGAATCTTTCGGGAAGATGGCTTATAACATTTCTTACCTGACCAGGG
TACCGGGAACCAACACCTTACTGGCGTGTTGCTGTCTTTCAAGACCAGACGAGGTTAACAGTGAATATTGA

Upstream 100 bases:

>100_bases
TTCGATGTGACGGAGCGAAACCCTTTGGGCGCTAAGTGTATTTTTTGTAAATCGACTATGATCACCTTTGATAACGTCGC
GCTGCAAATACGCACTGACC

Downstream 100 bases:

>100_bases
AGAGTTAAAAAAACAAGCCGAAACGGAAATCGCCGACTTTATCGCGCAAAAAATCGCCGAGCTGAACAAGAATACAGGGA
AAGAAGTCTCTGAAATTCGC

Product: cold shock gene

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 76; Mature: 76

Protein sequence:

>76_residues
MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKMAYNISYLTRVPGTNTLLACCCLSRPDEVNSEY

Sequences:

>Translated_76_residues
MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKMAYNISYLTRVPGTNTLLACCCLSRPDEVNSEY
>Mature_76_residues
MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKMAYNISYLTRVPGTNTLLACCCLSRPDEVNSEY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787225, Length=76, Percent_Identity=96.0526315789474, Blast_Score=151, Evalue=7e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8686; Mature: 8686

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
7.9 %Cys+Met (Translated Protein)
5.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKMAYNISYLTRVPGTNTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEECCCCCHH
LACCCLSRPDEVNSEY
HHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRRWISQNNIRLPRGAFFISALFFFNAVCIVSDNLLIIESFGKMAYNISYLTRVPGTNTL
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCHHCCCEEEEECCCCCHH
LACCCLSRPDEVNSEY
HHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]