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The map label for this gene is yadE

Identifier: 30061695

GI number: 30061695

Start: 142663

End: 143892

Strand: Direct

Name: yadE

Synonym: S0129

Alternate gene names: 30061695

Gene position: 142663-143892 (Clockwise)

Preceding gene: 30061694

Following gene: 30061697

Centisome position: 3.1

GC content: 49.11

Gene sequence:

>1230_bases
ATGTATAAACAAGCTGTTATTCTCCTGCTGATGCTGTTTACCGCAAGTGTCAGTGCCGCGTTACCTGCCCGTTATATGCA
AACCATCGAAAATGCTGCGGTCTGGGCGCAAATTAGTGACAAGATGGTGACCGTGGGGAATATTCGGGCCGGACAAATCA
TTGCCGTGGAGCCCACTGCCGCAAGTTATTACGCATTTAATTTTGGCTTTGGTAAAGGGTTTATCGATAAAGGGCATCTC
GAGCCAGTTCAGGGACGACAAAAAGTTGAAGACGGTTTGGGTGACCTCAACAAGCCGCTGAGTAATCAGAACTTAATTAC
CTGGAAAGATACGCCGGTCTACAACGCGCCGAGTGTGGGCAGTGCGCCATTTGGGGTACTGGCGGACAATTTGCGCTACC
CGATTTTGCATAAACTGAAAGACAGGTTAAATCAAACCTGGTATCAGATCCGTATTGGCGATCGACTGGCCTATATCAGC
GCGCTGGATGCCCAACCCGATAATGGCCTGCCGGTGCTAACTTATCACCATATTCTGCGCGACGAAGAAAACACCCGTTT
TCGCCATACTTCGACGACCACCTCGGTACGCGCTTTCAATAACCAAATGGCCTGGCTGCGCGACAGGGGATACGCGACAC
TGAGCATGGCTCAGCTGGAAGGTTACGTGAAGAATACGATCAATCTCCCTGCGCGAGCGGTGGTGATTACCTTTGATGAT
GGCCTCAAGTCGGTGAGCCGCTATGCGTATCCTGTGTTGAAACAATATGGCATGAAGGCGACGGTGTTTATTGTTACCTC
ACGCATCAAACGTCACCCGCAGAAGTGGAACCCAAAATCGCTGCAATTTATGAGCGTTTCTGAGCTTAACGAAATTCGCG
ATGTTTTTGATTTCCAGTCACATACCCATTTTTTGCATCGGGTAGATGGTTATCGCCGACCCATATTACTGAGCCGTAGT
GAGCACAATATTCTGTTTGATTTTGCACGTTCACGCCGCGCTCTGGCGCAATTTAATCCACATGTCTGGTATCTTTCGTA
TCCGTTTGGCGGCTTTAATGACAAAGCCGTGAAGGCAGCAAACGATGCCGGATTTCACCTGGCGGTGACAACCATGAAAG
GCAAAGTAAAACCGGGGGATAATCCGTTGTTACTAAAACGACTTTATATCTTAAGAACGGATTCGCTGGAGAAGATGTCG
CGGCTGGTGAGTAACCAGCCGCAGGGATAA

Upstream 100 bases:

>100_bases
GCCTTTCGTCCTCAAACATAATTTGTATGAGTATTAACCCGCGATTCTGATGGCGCTTTTGCTACAATAAAAGCGTTGTT
TCACCCTCGGTTATTTTTTC

Downstream 100 bases:

>100_bases
CAATCAAGCAACCTGTACCGGAATCGCTTTCGCGGTACGTTTCATTTCATTGTCGCCTTCAAAATAGGCGACATTGGGTC
GCCAGGTGCGAGCTTCTTCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 409; Mature: 409

Protein sequence:

>409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMS
RLVSNQPQG

Sequences:

>Translated_409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMS
RLVSNQPQG
>Mature_409_residues
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTAASYYAFNFGFGKGFIDKGHL
EPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVGSAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYIS
ALDAQPDNGLPVLTYHHILRDEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQSHTHFLHRVDGYRRPILLSRS
EHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAANDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMS
RLVSNQPQG

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=409, Percent_Identity=97.799511002445, Blast_Score=832, Evalue=0.0,
Organism=Escherichia coli, GI1787260, Length=245, Percent_Identity=25.3061224489796, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 46412; Mature: 46412

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCEEEEECCCC
ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEECC
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC
NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMSRLVSNQPQG
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC
>Mature Secondary Structure
MYKQAVILLLMLFTASVSAALPARYMQTIENAAVWAQISDKMVTVGNIRAGQIIAVEPTA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCCEEEEECCCC
ASYYAFNFGFGKGFIDKGHLEPVQGRQKVEDGLGDLNKPLSNQNLITWKDTPVYNAPSVG
CEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCCCCCCCC
SAPFGVLADNLRYPILHKLKDRLNQTWYQIRIGDRLAYISALDAQPDNGLPVLTYHHILR
CCCHHHHHCCCCCHHHHHHHHHHCCEEEEEEECCEEEEEEEECCCCCCCCEEEEEHHHHC
DEENTRFRHTSTTTSVRAFNNQMAWLRDRGYATLSMAQLEGYVKNTINLPARAVVITFDD
CCCCCEEEECCCCHHHHHHCCCCHHHHCCCCEEEEHHHHHHHHHHCCCCCCEEEEEEECC
GLKSVSRYAYPVLKQYGMKATVFIVTSRIKRHPQKWNPKSLQFMSVSELNEIRDVFDFQS
HHHHHHHHHHHHHHHCCCEEEEEEEEHHHHHCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
HTHFLHRVDGYRRPILLSRSEHNILFDFARSRRALAQFNPHVWYLSYPFGGFNDKAVKAA
HHHHHHHHCCCCCCEEEECCCCCEEEHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEC
NDAGFHLAVTTMKGKVKPGDNPLLLKRLYILRTDSLEKMSRLVSNQPQG
CCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCCCHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]