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The map label for this gene is yadD

Identifier: 30061697

GI number: 30061697

Start: 144550

End: 145452

Strand: Direct

Name: yadD

Synonym: S0131

Alternate gene names: 30061697

Gene position: 144550-145452 (Clockwise)

Preceding gene: 30061695

Following gene: 30061700

Centisome position: 3.14

GC content: 48.62

Gene sequence:

>903_bases
ATGGATGCACCGAGTACCACACCGCATGACGCGGTATTTAAACAATTTTTAATGCATGCGGAGACGGCTCGCGACTTTCT
GGAGATACATTTGCCAGTGGAATTACGCGAACTTTGTGATCTCAACACGCTTCATTTAGAGTCGGGGAGTTTCATTGAAG
AGTGCCTGAAAGGTCACAGCACGGACGTGCTCTATTCCATGCAAATGCAGGGCAATCCCGGTTATCTGCATGTTGTGATT
GAACACCAAAGCAAGCCGGATAAGAAAATGGCCTTTCGCATGATGCGTTATTCTATTGCTGCCATGCACCGGCATCTGGA
GGCTGGCCACGATAAGCTGCCGCTGGTGGTGCCGATACTGTTTTATCAGGGCGAGGCCACACCTTATCCGCTCTCAATGT
GCTGGTTTGATATGTTTTACTCGCCGGAGCTGGCGCGACGCGTCTATAACAGTCCTTTCCCGCTGGTGGATATCACCATC
ACACCGGATGACGAAATCATGCAACATCGGCGGATTGCGATTCTCGAACTACTGCAAAAACATATTCGCCAGCGCGACTT
AATGTTATTGCTGGAGCAACTGGTCACGCTGATTGACGAAGGGTACACTAGCGGAAGTCAGTTAGTTGCCATGCAAAACT
ATATGCTGCAACGCGGTCATACTGAACAAGCGGATTTGTTTTATGGTGTGCTGAGAGACAGGGAAACGGGAGGGAAGTCT
ATGATGACGCTGGCGCAGTGGTTTGAAGAGAAAGGGATTGAGAAGGGGATTCAGCAGGGAAGACAGGAGGAAAGGCAAGA
ATTCGCCCTGCGTCTTCTAAGTAAAGGAATGTCTCGGGAAGACGTTGCAGAGATGGCAAATTTACCTCTTGCTGAGATTG
ATAAGGTAATTAACCTTATTTAA

Upstream 100 bases:

>100_bases
TTTTATGAACGCTGCTCGGTAAACAATAAAGAGGTGGCTGACGATAGCACGCCTTGACTGGATACTGCCTTCACGCAAGG
CCACACGGAAGACAGGGAAG

Downstream 100 bases:

>100_bases
GTTACCTGTGTTATGACAGATGACGTGGGGTAAATTAATAACTGGCGCCATCAGCCGTAGCGCCAGTTAAGTATTACGCC
AGCTCGACCATTTTGTTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEECLKGHSTDVLYSMQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEAGHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGKS
MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI

Sequences:

>Translated_300_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEECLKGHSTDVLYSMQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEAGHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGKS
MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI
>Mature_300_residues
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEECLKGHSTDVLYSMQMQGNPGYLHVVI
EHQSKPDKKMAFRMMRYSIAAMHRHLEAGHDKLPLVVPILFYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITI
TPDDEIMQHRRIAILELLQKHIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGKS
MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

Organism=Escherichia coli, GI1786324, Length=300, Percent_Identity=97.6666666666667, Blast_Score=607, Evalue=1e-175,
Organism=Escherichia coli, GI1788643, Length=287, Percent_Identity=52.9616724738676, Blast_Score=311, Evalue=4e-86,
Organism=Escherichia coli, GI1788577, Length=293, Percent_Identity=50.5119453924915, Blast_Score=301, Evalue=4e-83,
Organism=Escherichia coli, GI1789816, Length=290, Percent_Identity=48.2758620689655, Blast_Score=284, Evalue=4e-78,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 34681; Mature: 34681

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.0 %Met     (Translated Protein)
7.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
6.0 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEECLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHHCCCC
TDVLYSMQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEAGHDKLPLVVPIL
CCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGKS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH
MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure
MDAPSTTPHDAVFKQFLMHAETARDFLEIHLPVELRELCDLNTLHLESGSFIEECLKGHS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCEEEECCCHHHHHHHCCCC
TDVLYSMQMQGNPGYLHVVIEHQSKPDKKMAFRMMRYSIAAMHRHLEAGHDKLPLVVPIL
CCEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEE
FYQGEATPYPLSMCWFDMFYSPELARRVYNSPFPLVDITITPDDEIMQHRRIAILELLQK
EECCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
HIRQRDLMLLLEQLVTLIDEGYTSGSQLVAMQNYMLQRGHTEQADLFYGVLRDRETGGKS
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHH
MMTLAQWFEEKGIEKGIQQGRQEERQEFALRLLSKGMSREDVAEMANLPLAEIDKVINLI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]