| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29350142
Identifier: 29350142
GI number: 29350142
Start: 6210159
End: 6212225
Strand: Reverse
Name: 29350142
Synonym: BT_4734
Alternate gene names: NA
Gene position: 6212225-6210159 (Counterclockwise)
Preceding gene: 29350145
Following gene: 29350139
Centisome position: 99.23
GC content: 46.2
Gene sequence:
>2067_bases ATGACCGAAGAAGAAATAGTGTCCACTATCGGCAGTTTTACCTACCGGGAAAAAGTCGAAGAAATACGCCGCATCTTTGC AGAGCAAGGAGAAAAGGCTGCCAATGAGAAGAAAAAAGAATTGCCGGCAATCGCCTTCTCCGCCAGCTACCGAGGAAGGC GTACCAAAGTGAACCTCGTCAAATATCTGGGACACATCGTGATAGACATCGACCACCTCAGCAAAGAAGAATTGGCACGC ATCCTCCCTATCATCAAGAGATGCGATTACACCCGCATCGCCTTTATCAGTCCCAAAGGGATGGGCGTGAAAATCATAGT GCGCGCATGCCATCCGGATGAGACATTGCCCGAAACCCTTCAGGAAATAGAAGACTTCCATCATGCAGCTTACACCAGAC TCGTTTCTTTTTACACCGAACTCTGTCGGATAGAAATCGACACCTCCGGTCAGGATGTGGCACGCACTTGTCTGTTCTCT TACGATCCGGAGATCTATTTCAATCCGAACGCTGACGCTTTTCTTGTAGATCAACCTCAGGCATCCTACAAGATTTCAAA TCGTAAAAATCTCTCCGGCAGTAAACAACAGACTCCTCCGGACGGCACCCCGACGAATGAAGACACAGCACTCAACGCCC ATTCCGCCAACGCTTCTTTGGTGTTGACTTTAACTTACTATCACAACAAGTCCGAAAAATACATAGCAGGCAACCGGAAC AATTATCTGCACCATCTCTCATGTACCTTCAATCGCTACGGCATTCCGCAGGAGGAAACATCCGCCTTTATCAAAAGCCA GTTTACAGACTTTCCGGCGGACGAGACAGTCTCTTTGATCAATAGCGCCTACGCTCATACCGACGAATTTAATACCTGTA AACTGAATGGCACGCAGAAACGAATATTACGGATAGAACAATATATCAGCGAGCACTACGAAACACGCTACAATGAAGTG CTGCATATCATGGAATATCGCAGAAGGCGTCCCGACACCGAGAAACCGGAGCCTTTCCGCATCTTGGATGAGATGATGGA AAACAGTATCTGGATAGAAATCAACGAGCTGGGATATCCCTGCACTGTCAAAACAATCGAAAATCTGATTTACTCCGATT TCAGCCAGTCGTATCATCCCATTCGCGAGTATTTTGAATTACTGCCCGAATGGGACGGAACCGACTATATCCGTATCCTG GCGGATAGTGTCCAGACGAGTCATCAGGAGTTTTGGGCGGAATGCCTGGAACGTTATCTGGTGGCGATGTGCGCAGCGGC TACTCAGGAGAATATTGTCAATCACACGGTACTTCTGCTATGCAGCGAGATACAGAACATAGGAAAGACTACCTTTATCA ATAATCTCCTGCCTCCCGAACTGCGTGCTTATCTCTCTACCGGACTAATCAATTCGAACAATAAAGATGATTTAGCCAAA ATAACGCAGGCCATGCTGATCAATCTCGACGAGTTTGAAGGGATGAGCGGTCGGGAACTGAATGCATTCAAAGATTTGGT AACGCGCAAAGTGATCAGTTTCCGTCTGCCATATGCACGCCGTTCGCAAAACTTCCCTCATACGGCCTCTTTTGCAGGAA CCTGCAATTATCAGGAAGTGCTTCACGACACGACAGGCAACCGGCGTTTCCTTTGTTTTCATCCTTATTCCATCCAATTT ATTACCATCAATTATGCGCAGCTCTATGCTCAGATCAAATATCTGCTGAATAAGCCGGGGTACCAATACTGGTTCACGCA AGCGGACAATGAACGGCTTGAAGAGAATAACGAGGCTTTCATCTTTCATTCACCGGAAGAAGAAATGGTTCTTACGCATA TCCGCAAGCCGGAACGTTTTGAGAAGGTTTATTATCTGACTGTCAGTGAGATTGCGGAACTAATACGTGAGCGTACCGGT TATCAGTATTCCATCGGATCAAAAATACAGTTGGGGAAGGTGATGACTAAGCACCATTTTGAATCTAAAAAAGGAAATAA CGGGCGCCGATATGCCGTATTTATTATAGATATCGAGCAGGTAAAATCAAACAGGCTGTATGAATAG
Upstream 100 bases:
>100_bases ACATTTCCGCAAAGAAGTTCCTTTGCATCGACAAACAATAATCAAAATAAAAATGAAACATTTCACCATATTTCAAGGTT TCTACTACGCAATAGCAGAG
Downstream 100 bases:
>100_bases AAGCGGGAAAGCCTTGTGAATATAGCAAAATGCAGAGTCATCTTGACAGATACTCTGCATTTATTGTTTTTACAAAATCA TTGAAAATTCGATTTTACAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 688; Mature: 687
Protein sequence:
>688_residues MTEEEIVSTIGSFTYREKVEEIRRIFAEQGEKAANEKKKELPAIAFSASYRGRRTKVNLVKYLGHIVIDIDHLSKEELAR ILPIIKRCDYTRIAFISPKGMGVKIIVRACHPDETLPETLQEIEDFHHAAYTRLVSFYTELCRIEIDTSGQDVARTCLFS YDPEIYFNPNADAFLVDQPQASYKISNRKNLSGSKQQTPPDGTPTNEDTALNAHSANASLVLTLTYYHNKSEKYIAGNRN NYLHHLSCTFNRYGIPQEETSAFIKSQFTDFPADETVSLINSAYAHTDEFNTCKLNGTQKRILRIEQYISEHYETRYNEV LHIMEYRRRRPDTEKPEPFRILDEMMENSIWIEINELGYPCTVKTIENLIYSDFSQSYHPIREYFELLPEWDGTDYIRIL ADSVQTSHQEFWAECLERYLVAMCAAATQENIVNHTVLLLCSEIQNIGKTTFINNLLPPELRAYLSTGLINSNNKDDLAK ITQAMLINLDEFEGMSGRELNAFKDLVTRKVISFRLPYARRSQNFPHTASFAGTCNYQEVLHDTTGNRRFLCFHPYSIQF ITINYAQLYAQIKYLLNKPGYQYWFTQADNERLEENNEAFIFHSPEEEMVLTHIRKPERFEKVYYLTVSEIAELIRERTG YQYSIGSKIQLGKVMTKHHFESKKGNNGRRYAVFIIDIEQVKSNRLYE
Sequences:
>Translated_688_residues MTEEEIVSTIGSFTYREKVEEIRRIFAEQGEKAANEKKKELPAIAFSASYRGRRTKVNLVKYLGHIVIDIDHLSKEELAR ILPIIKRCDYTRIAFISPKGMGVKIIVRACHPDETLPETLQEIEDFHHAAYTRLVSFYTELCRIEIDTSGQDVARTCLFS YDPEIYFNPNADAFLVDQPQASYKISNRKNLSGSKQQTPPDGTPTNEDTALNAHSANASLVLTLTYYHNKSEKYIAGNRN NYLHHLSCTFNRYGIPQEETSAFIKSQFTDFPADETVSLINSAYAHTDEFNTCKLNGTQKRILRIEQYISEHYETRYNEV LHIMEYRRRRPDTEKPEPFRILDEMMENSIWIEINELGYPCTVKTIENLIYSDFSQSYHPIREYFELLPEWDGTDYIRIL ADSVQTSHQEFWAECLERYLVAMCAAATQENIVNHTVLLLCSEIQNIGKTTFINNLLPPELRAYLSTGLINSNNKDDLAK ITQAMLINLDEFEGMSGRELNAFKDLVTRKVISFRLPYARRSQNFPHTASFAGTCNYQEVLHDTTGNRRFLCFHPYSIQF ITINYAQLYAQIKYLLNKPGYQYWFTQADNERLEENNEAFIFHSPEEEMVLTHIRKPERFEKVYYLTVSEIAELIRERTG YQYSIGSKIQLGKVMTKHHFESKKGNNGRRYAVFIIDIEQVKSNRLYE >Mature_687_residues TEEEIVSTIGSFTYREKVEEIRRIFAEQGEKAANEKKKELPAIAFSASYRGRRTKVNLVKYLGHIVIDIDHLSKEELARI LPIIKRCDYTRIAFISPKGMGVKIIVRACHPDETLPETLQEIEDFHHAAYTRLVSFYTELCRIEIDTSGQDVARTCLFSY DPEIYFNPNADAFLVDQPQASYKISNRKNLSGSKQQTPPDGTPTNEDTALNAHSANASLVLTLTYYHNKSEKYIAGNRNN YLHHLSCTFNRYGIPQEETSAFIKSQFTDFPADETVSLINSAYAHTDEFNTCKLNGTQKRILRIEQYISEHYETRYNEVL HIMEYRRRRPDTEKPEPFRILDEMMENSIWIEINELGYPCTVKTIENLIYSDFSQSYHPIREYFELLPEWDGTDYIRILA DSVQTSHQEFWAECLERYLVAMCAAATQENIVNHTVLLLCSEIQNIGKTTFINNLLPPELRAYLSTGLINSNNKDDLAKI TQAMLINLDEFEGMSGRELNAFKDLVTRKVISFRLPYARRSQNFPHTASFAGTCNYQEVLHDTTGNRRFLCFHPYSIQFI TINYAQLYAQIKYLLNKPGYQYWFTQADNERLEENNEAFIFHSPEEEMVLTHIRKPERFEKVYYLTVSEIAELIRERTGY QYSIGSKIQLGKVMTKHHFESKKGNNGRRYAVFIIDIEQVKSNRLYE
Specific function: Unknown
COG id: COG5545
COG function: function code R; Predicted P-loop ATPase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80059; Mature: 79928
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEEEIVSTIGSFTYREKVEEIRRIFAEQGEKAANEKKKELPAIAFSASYRGRRTKVNLV CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHH KYLGHIVIDIDHLSKEELARILPIIKRCDYTRIAFISPKGMGVKIIVRACHPDETLPETL HHHHHHEEEEHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHH QEIEDFHHAAYTRLVSFYTELCRIEIDTSGQDVARTCLFSYDPEIYFNPNADAFLVDQPQ HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEECCCCCEEEEECCC ASYKISNRKNLSGSKQQTPPDGTPTNEDTALNAHSANASLVLTLTYYHNKSEKYIAGNRN CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCEEECCCC NYLHHLSCTFNRYGIPQEETSAFIKSQFTDFPADETVSLINSAYAHTDEFNTCKLNGTQK CEEEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH RILRIEQYISEHYETRYNEVLHIMEYRRRRPDTEKPEPFRILDEMMENSIWIEINELGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC CTVKTIENLIYSDFSQSYHPIREYFELLPEWDGTDYIRILADSVQTSHQEFWAECLERYL EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAMCAAATQENIVNHTVLLLCSEIQNIGKTTFINNLLPPELRAYLSTGLINSNNKDDLAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH ITQAMLINLDEFEGMSGRELNAFKDLVTRKVISFRLPYARRSQNFPHTASFAGTCNYQEV HHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHH LHDTTGNRRFLCFHPYSIQFITINYAQLYAQIKYLLNKPGYQYWFTQADNERLEENNEAF HHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCEE IFHSPEEEMVLTHIRKPERFEKVYYLTVSEIAELIRERTGYQYSIGSKIQLGKVMTKHHF EEECCCHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHCCCEEECCCCEEHHHHHHHHHH ESKKGNNGRRYAVFIIDIEQVKSNRLYE CCCCCCCCCEEEEEEEEHHHHCCCCCCC >Mature Secondary Structure TEEEIVSTIGSFTYREKVEEIRRIFAEQGEKAANEKKKELPAIAFSASYRGRRTKVNLV CHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCEEEEECCCCCCCHHHHHH KYLGHIVIDIDHLSKEELARILPIIKRCDYTRIAFISPKGMGVKIIVRACHPDETLPETL HHHHHHEEEEHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEEEECCCCCHHHHHH QEIEDFHHAAYTRLVSFYTELCRIEIDTSGQDVARTCLFSYDPEIYFNPNADAFLVDQPQ HHHHHHHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHCCCCEEEECCCCCEEEEECCC ASYKISNRKNLSGSKQQTPPDGTPTNEDTALNAHSANASLVLTLTYYHNKSEKYIAGNRN CCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEEEEECCCCCEEECCCC NYLHHLSCTFNRYGIPQEETSAFIKSQFTDFPADETVSLINSAYAHTDEFNTCKLNGTQK CEEEEEEEEHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCHHH RILRIEQYISEHYETRYNEVLHIMEYRRRRPDTEKPEPFRILDEMMENSIWIEINELGYP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCEEEEEECCCCC CTVKTIENLIYSDFSQSYHPIREYFELLPEWDGTDYIRILADSVQTSHQEFWAECLERYL EEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH VAMCAAATQENIVNHTVLLLCSEIQNIGKTTFINNLLPPELRAYLSTGLINSNNKDDLAK HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHH ITQAMLINLDEFEGMSGRELNAFKDLVTRKVISFRLPYARRSQNFPHTASFAGTCNYQEV HHHHHHHCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHH LHDTTGNRRFLCFHPYSIQFITINYAQLYAQIKYLLNKPGYQYWFTQADNERLEENNEAF HHCCCCCEEEEEECCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCCHHHCCCCCEE IFHSPEEEMVLTHIRKPERFEKVYYLTVSEIAELIRERTGYQYSIGSKIQLGKVMTKHHF EEECCCHHHHHHHCCCCHHHHHEEEEEHHHHHHHHHHHCCCEEECCCCEEHHHHHHHHHH ESKKGNNGRRYAVFIIDIEQVKSNRLYE CCCCCCCCCEEEEEEEEHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA