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The map label for this gene is yidJ [H]

Identifier: 29350064

GI number: 29350064

Start: 6092550

End: 6094226

Strand: Reverse

Name: yidJ [H]

Synonym: BT_4656

Alternate gene names: 29350064

Gene position: 6094226-6092550 (Counterclockwise)

Preceding gene: 29350065

Following gene: 29350063

Centisome position: 97.35

GC content: 47.05

Gene sequence:

>1677_bases
ATGCCCGCTACGGAAAAGGCCTCGGCTCCTCACTGGTCATTTTTATCATCAGATGTTATTTCTATCATGAAAAGCAACCC
CTCTACCCTATTGCTTCCATTGGCAGCACTAAGCCTTGCTTCCTGTGCCAACCCCCAAAAAGAAGAAACCAAACGTCCGA
ACATCATCTTCATGATGACCGACGACCATACCACCCAAGCCATGTCCTGCTATGGTGGCAACCTCATCCAAACTCCCAAC
ATGGACCGCATAGCCAATGAGGGTATCCGTTTTGACAATTGTTATGCAGTCAATGCCCTCTCCGGCCCTTCACGTGCCTG
CATTCTCACCGGAAAATTCAGCCATGAGAACGGCTTTACCGATAATGCAAGCACCTTCAACGGTGATCAGCAGACATTCC
CGAAACTACTTCAACAAGCCGGTTATCAGACTGCCATGATCGGTAAATGGCATCTTATCAGCGAACCGCAGGGATTTGAC
CACTGGAGCATACTCAGCGGCCAGCATGAGCAGGGCGACTACTACGACCCTGACTTTTGGGAAGACGGAAAGCACATCGT
AGAAAAAGGATATGCAACGGATATTATCACCGACAAGGCAATCAATTTCCTCGAAAACCGCGACAAGAACAAACCTTTCT
GCATGATGTATCATCAGAAAGCTCCCCACCGTAACTGGATGCCCGCCCCCCGCCATCTGGGTATATTCAACAATACTATT
TTCCCCGAACCCGCAAACCTGTTCGATGACTACGAAGGACGCGGGAAAGCGGCACGGGAACAAGATATGTCGATCGAACA
TACGCTGACGAATGACTGGGACTTGAAACTGCTCACTCGCGAAGAAATGCTGAAAGATACGACAAACCGCCTGTATAGCG
TTTATAAGCGTATGCCCTCAGAAGTACAGGACAAATGGGATTCCGCCTATGCACAGCGCATTGCCGAATACCGCAAAGGC
GACCTGAAAGGCAAGGCATTAATCAGCTGGAAATACCAGCAATATATGCGCGATTATCTGGCTACCGTTCTGGCTGTAGA
CGAGAATATCGGTCGTCTGCTGAATTATCTCGAAAAGATCGGCGAACTGGACAATACCATTATTGTCTATACTTCCGACC
AAGGATTCTTTCTGGGTGAACACGGCTGGTTTGACAAACGATTCATGTACGAAGAATGTCAGCGTATGCCGCTTATCATC
CGTTATCCGAAGGCCATTAAAGCCGGAAGCACCAGCAGCGCCATCAGCATGAACGTAGACTTCGCCCCTACCTTCCTTGA
CTTTGCCGGTGTAGAAGTGCCATCTGATATTCAGGGAGCATCACTGAAACCTGTATTGGAAAACGAAGGCAAAACTCCTG
CCGACTGGCGTAAAGCAGCCTACTATCATTATTATGAATATCCGGCAGAACACTCCGTAAAACGTCATTATGGCATTCGC
ACGCAGGACTTCAAACTGATTCATTTCTACAACGACATTGACGAATGGGAAATGTATGACATGAAAGCCGACCCAAGAGA
AATGAACAATATCTTCGGGAAAGCGGAATATGCTAAGAAACAAAAAGAGTTGATGCAACTACTTGAAGAAACTCAGAAAC
AATATAAAGACAATGATCCCGATGAAAAAGAGACAGTGCTTTTCAAAGGAGACAGAAGACTGATGGAAAATCGATAA

Upstream 100 bases:

>100_bases
GGAAATAGAAGTGAAAGTAAACGGCAAGAAACAGTCATTAAAATATAAATTATAATCCAGTGACCAGCGAGGCACTGAGG
CCAGATTTCCATGCGGATAT

Downstream 100 bases:

>100_bases
ATAACCCAAAACAATCATATCATGGACAGAAGAAATTTTATAAAGAATACTGGCTGGTCTTTTTTAGGACTGGCAGCATC
CGGCAGCCTGCTCGGCTCTT

Product: N-acetylglucosamine-6-sulfatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 558; Mature: 557

Protein sequence:

>558_residues
MPATEKASAPHWSFLSSDVISIMKSNPSTLLLPLAALSLASCANPQKEETKRPNIIFMMTDDHTTQAMSCYGGNLIQTPN
MDRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFTDNASTFNGDQQTFPKLLQQAGYQTAMIGKWHLISEPQGFD
HWSILSGQHEQGDYYDPDFWEDGKHIVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTI
FPEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPSEVQDKWDSAYAQRIAEYRKG
DLKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKIGELDNTIIVYTSDQGFFLGEHGWFDKRFMYEECQRMPLII
RYPKAIKAGSTSSAISMNVDFAPTFLDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIR
TQDFKLIHFYNDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQYKDNDPDEKETVLFKGDRRLMENR

Sequences:

>Translated_558_residues
MPATEKASAPHWSFLSSDVISIMKSNPSTLLLPLAALSLASCANPQKEETKRPNIIFMMTDDHTTQAMSCYGGNLIQTPN
MDRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFTDNASTFNGDQQTFPKLLQQAGYQTAMIGKWHLISEPQGFD
HWSILSGQHEQGDYYDPDFWEDGKHIVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTI
FPEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPSEVQDKWDSAYAQRIAEYRKG
DLKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKIGELDNTIIVYTSDQGFFLGEHGWFDKRFMYEECQRMPLII
RYPKAIKAGSTSSAISMNVDFAPTFLDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIR
TQDFKLIHFYNDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQYKDNDPDEKETVLFKGDRRLMENR
>Mature_557_residues
PATEKASAPHWSFLSSDVISIMKSNPSTLLLPLAALSLASCANPQKEETKRPNIIFMMTDDHTTQAMSCYGGNLIQTPNM
DRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFTDNASTFNGDQQTFPKLLQQAGYQTAMIGKWHLISEPQGFDH
WSILSGQHEQGDYYDPDFWEDGKHIVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTIF
PEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPSEVQDKWDSAYAQRIAEYRKGD
LKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKIGELDNTIIVYTSDQGFFLGEHGWFDKRFMYEECQRMPLIIR
YPKAIKAGSTSSAISMNVDFAPTFLDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIRT
QDFKLIHFYNDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQYKDNDPDEKETVLFKGDRRLMENR

Specific function: Unknown

COG id: COG3119

COG function: function code P; Arylsulfatase A and related enzymes

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sulfatase family [H]

Homologues:

Organism=Homo sapiens, GI4504061, Length=439, Percent_Identity=28.0182232346241, Blast_Score=145, Evalue=1e-34,
Organism=Homo sapiens, GI4503899, Length=277, Percent_Identity=31.7689530685921, Blast_Score=103, Evalue=6e-22,
Organism=Homo sapiens, GI58743319, Length=113, Percent_Identity=41.5929203539823, Blast_Score=96, Evalue=9e-20,
Organism=Homo sapiens, GI240255483, Length=114, Percent_Identity=40.3508771929825, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI29789100, Length=114, Percent_Identity=40.3508771929825, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI240255478, Length=114, Percent_Identity=40.3508771929825, Blast_Score=94, Evalue=5e-19,
Organism=Homo sapiens, GI189571643, Length=114, Percent_Identity=40.3508771929825, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI189571641, Length=114, Percent_Identity=40.3508771929825, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI189571638, Length=114, Percent_Identity=40.3508771929825, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI189571636, Length=114, Percent_Identity=40.3508771929825, Blast_Score=93, Evalue=6e-19,
Organism=Homo sapiens, GI53831991, Length=118, Percent_Identity=38.9830508474576, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI71852586, Length=120, Percent_Identity=36.6666666666667, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI71852584, Length=120, Percent_Identity=36.6666666666667, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI157266309, Length=127, Percent_Identity=36.2204724409449, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI31742482, Length=140, Percent_Identity=28.5714285714286, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI45430057, Length=212, Percent_Identity=28.3018867924528, Blast_Score=82, Evalue=2e-15,
Organism=Homo sapiens, GI39930577, Length=192, Percent_Identity=30.2083333333333, Blast_Score=81, Evalue=3e-15,
Organism=Homo sapiens, GI38569407, Length=204, Percent_Identity=28.921568627451, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI38569405, Length=204, Percent_Identity=28.921568627451, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI109389362, Length=210, Percent_Identity=27.1428571428571, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI59797060, Length=196, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI146229331, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI146229329, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI6005990, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI146229324, Length=136, Percent_Identity=33.8235294117647, Blast_Score=75, Evalue=1e-13,
Organism=Escherichia coli, GI1790112, Length=520, Percent_Identity=26.7307692307692, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI87081924, Length=189, Percent_Identity=32.8042328042328, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1790233, Length=245, Percent_Identity=27.7551020408163, Blast_Score=66, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17568795, Length=412, Percent_Identity=26.4563106796117, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17559078, Length=129, Percent_Identity=31.0077519379845, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24653364, Length=439, Percent_Identity=28.246013667426, Blast_Score=147, Evalue=2e-35,
Organism=Drosophila melanogaster, GI19922168, Length=439, Percent_Identity=28.0182232346241, Blast_Score=145, Evalue=9e-35,
Organism=Drosophila melanogaster, GI24647401, Length=121, Percent_Identity=42.9752066115703, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI24666175, Length=223, Percent_Identity=32.7354260089686, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI281366397, Length=228, Percent_Identity=29.3859649122807, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI281366395, Length=228, Percent_Identity=29.3859649122807, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666163, Length=228, Percent_Identity=29.3859649122807, Blast_Score=84, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24666109, Length=209, Percent_Identity=30.1435406698565, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI281363223, Length=230, Percent_Identity=27.3913043478261, Blast_Score=74, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017849
- InterPro:   IPR017850
- InterPro:   IPR000917 [H]

Pfam domain/function: PF00884 Sulfatase [H]

EC number: 3.1.6.- [C]

Molecular weight: Translated: 64585; Mature: 64454

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: PS00523 SULFATASE_1 ; PS00149 SULFATASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPATEKASAPHWSFLSSDVISIMKSNPSTLLLPLAALSLASCANPQKEETKRPNIIFMMT
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHCCCCCEEEEEE
DDHTTQAMSCYGGNLIQTPNMDRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFT
CCCCHHHHHHCCCCEECCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCC
DNASTFNGDQQTFPKLLQQAGYQTAMIGKWHLISEPQGFDHWSILSGQHEQGDYYDPDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCCCH
EDGKHIVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTI
HCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
FPEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPS
CCCCHHHHCCCCCCCCCHHHHCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCH
EVQDKWDSAYAQRIAEYRKGDLKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELDNTIIVYTSDQGFFLGEHGWFDKRFMYEECQRMPLIIRYPKAIKAGSTSSAISMNVD
CCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCHHCCCCCCCEEEEECC
FAPTFLDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIR
CCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCC
TQDFKLIHFYNDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQYKDNDP
CCCEEEEEEECCCCCCEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEKETVLFKGDRRLMENR
CCCCEEEEECCHHHHCCC
>Mature Secondary Structure 
PATEKASAPHWSFLSSDVISIMKSNPSTLLLPLAALSLASCANPQKEETKRPNIIFMMT
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHCCCCCHHHCCCCCEEEEEE
DDHTTQAMSCYGGNLIQTPNMDRIANEGIRFDNCYAVNALSGPSRACILTGKFSHENGFT
CCCCHHHHHHCCCCEECCCCHHHHHHCCCCCCCEEEEECCCCCCCEEEEEECCCCCCCCC
DNASTFNGDQQTFPKLLQQAGYQTAMIGKWHLISEPQGFDHWSILSGQHEQGDYYDPDFW
CCCCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCHHEECCCCCCCCCCCCCCH
EDGKHIVEKGYATDIITDKAINFLENRDKNKPFCMMYHQKAPHRNWMPAPRHLGIFNNTI
HCCHHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCC
FPEPANLFDDYEGRGKAAREQDMSIEHTLTNDWDLKLLTREEMLKDTTNRLYSVYKRMPS
CCCCHHHHCCCCCCCCCHHHHCCCEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHCCH
EVQDKWDSAYAQRIAEYRKGDLKGKALISWKYQQYMRDYLATVLAVDENIGRLLNYLEKI
HHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GELDNTIIVYTSDQGFFLGEHGWFDKRFMYEECQRMPLIIRYPKAIKAGSTSSAISMNVD
CCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHCCCCEEEECCCHHCCCCCCCEEEEECC
FAPTFLDFAGVEVPSDIQGASLKPVLENEGKTPADWRKAAYYHYYEYPAEHSVKRHYGIR
CCHHHHHHCCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHEEEEEECCCHHHHHHHCCCC
TQDFKLIHFYNDIDEWEMYDMKADPREMNNIFGKAEYAKKQKELMQLLEETQKQYKDNDP
CCCEEEEEEECCCCCCEEECCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DEKETVLFKGDRRLMENR
CCCCEEEEECCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds; Sulfuric ester hydrolases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7686882; 9278503 [H]