| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349998
Identifier: 29349998
GI number: 29349998
Start: 6012391
End: 6012795
Strand: Reverse
Name: 29349998
Synonym: BT_4590
Alternate gene names: NA
Gene position: 6012795-6012391 (Counterclockwise)
Preceding gene: 29350005
Following gene: 29349997
Centisome position: 96.05
GC content: 37.53
Gene sequence:
>405_bases ATGGAAGATTTTAAAAAGAAAATGAACGCAGACATGAATGATAAGGAGATCGTTTTCTCCAAGTCCATCAAAGCAGGTAA ACGCATCTATTACCTCGATGTGAAGAAGAACCGTAAAGATGAAATGTTTTTAGCTATTACGGAGAGTAAGAAAGTGGTGA TGGGAGAAGGAGATGACTCTCAGGTTAGCTTCGAAAAGCATAAAATCTTCTTATATAAGGAGGATTTTCAGAAATTTATG GCAGGATTGACAGAAGCCATCAGTTTTATTAACCACAGTGACATGAACGATTACATCAGCCGCCTGAACGAAGAAGCTGA TATAAAAAGAGAACAGGAAGCTCTTGCCGAACAAGCACAAGAGGACAAGCTGGAAAACGAAATTAAGATTGATATTGACT TTTAA
Upstream 100 bases:
>100_bases TCACATTTTTTAATGCAGTATTTGATTCTCTGCGCTTTTTCTTTTGACAGTTTAAAAAAAATATCCAATTTTGAGGCCGA TTATTAACGGACCCAATGAT
Downstream 100 bases:
>100_bases AGAGGTAACTCTTTGATATTTCAAAAAAAAACAGTACTTTTGCACCGCTTTTTTGCAACATCATGTGATAATCCACATCG TGTAATGGTGAATTAAGCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MEDFKKKMNADMNDKEIVFSKSIKAGKRIYYLDVKKNRKDEMFLAITESKKVVMGEGDDSQVSFEKHKIFLYKEDFQKFM AGLTEAISFINHSDMNDYISRLNEEADIKREQEALAEQAQEDKLENEIKIDIDF
Sequences:
>Translated_134_residues MEDFKKKMNADMNDKEIVFSKSIKAGKRIYYLDVKKNRKDEMFLAITESKKVVMGEGDDSQVSFEKHKIFLYKEDFQKFM AGLTEAISFINHSDMNDYISRLNEEADIKREQEALAEQAQEDKLENEIKIDIDF >Mature_134_residues MEDFKKKMNADMNDKEIVFSKSIKAGKRIYYLDVKKNRKDEMFLAITESKKVVMGEGDDSQVSFEKHKIFLYKEDFQKFM AGLTEAISFINHSDMNDYISRLNEEADIKREQEALAEQAQEDKLENEIKIDIDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15777; Mature: 15777
Theoretical pI: Translated: 4.72; Mature: 4.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDFKKKMNADMNDKEIVFSKSIKAGKRIYYLDVKKNRKDEMFLAITESKKVVMGEGDDS CCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEECCCCC QVSFEKHKIFLYKEDFQKFMAGLTEAISFINHSDMNDYISRLNEEADIKREQEALAEQAQ CEEHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH EDKLENEIKIDIDF HHHCCCEEEEEECC >Mature Secondary Structure MEDFKKKMNADMNDKEIVFSKSIKAGKRIYYLDVKKNRKDEMFLAITESKKVVMGEGDDS CCCHHHHHCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCEEEEEECCCEEEEECCCCC QVSFEKHKIFLYKEDFQKFMAGLTEAISFINHSDMNDYISRLNEEADIKREQEALAEQAQ CEEHHHEEEEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH EDKLENEIKIDIDF HHHCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA