| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349983
Identifier: 29349983
GI number: 29349983
Start: 5995753
End: 5996529
Strand: Reverse
Name: 29349983
Synonym: BT_4575
Alternate gene names: NA
Gene position: 5996529-5995753 (Counterclockwise)
Preceding gene: 29349984
Following gene: 29349982
Centisome position: 95.79
GC content: 41.7
Gene sequence:
>777_bases ATGCGTATATTTTATCTTATCCTCTGTTTCATCTGCCTTTGCGACCTGCTCCATGCGCAGACTGTAAGAATCTCTTATGA AGGCGACCCGCTTACGGACAAAGAACGCCGGAAGATTGAACAGACCCTCCAATATGAAGTCGAATTTTATGCACAATTCG GACTTCCCGATACGCTTAATCTTCAATTGACTGTATTCAACAAAAGGGAAGATGCGCTGGTCTATCTGAACAAATTCAAT ATACATCCTCCCAAAAGTACAAACGGAATGTATATATCCAGATTACAAAAGGCCATCATATTAAGCAGAGAAAAAGAATA CCAACAAGGTCTGGGCGTCATCTATCACGAACTGAGCCATCACCTCACCTTGCAAATCACGGCAGGACGTCCTCCGATAT GGTTCAACGAGGGACTTGCCGAATATTTTGAGCATTGTAAAGTTAATAAAAAAGGACTTCAGCACACGTTTACCGATTAC GAAAAAGGAAGAATCCGCACTATATATATGTTGGGGGACATTGATCTGCTCACCTTTATCAACAGCCGCCAAAAGGAATT TATGAAGCAGCAAAGAACCGACGAACAATACGCCTATATCCTCTCTCATGCACTCGTCACTTTCTGGATCGAGAAAGTTC CCCGGCAGATATTACGTGATTTTGTACTCTCCTTTCAAAACAAAGATGACTCATCCATTGTTTCCGAACGGATAGATAAG GTTTACACCGGAGGGTTCAAACAATTTGAAAAAGATTTTGAAGCCTTCTGCAAATAG
Upstream 100 bases:
>100_bases ATAAATCTGCCACAGATGATGAACTGATTATGCTCGAAATGAGCAAACGTGAAAAAAAGAAATTTCAGAAGCAGAAATAC TCAAAATAAAGGGAAACAAT
Downstream 100 bases:
>100_bases TTTTATCTTTTTTCTATCTTTGCACCGGCTATGGGATTAGCCTTTAACCGCCCTTTGGAGCTGATGATCCCTACAATTTG AATGTATAACTCTTAAATTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MRIFYLILCFICLCDLLHAQTVRISYEGDPLTDKERRKIEQTLQYEVEFYAQFGLPDTLNLQLTVFNKREDALVYLNKFN IHPPKSTNGMYISRLQKAIILSREKEYQQGLGVIYHELSHHLTLQITAGRPPIWFNEGLAEYFEHCKVNKKGLQHTFTDY EKGRIRTIYMLGDIDLLTFINSRQKEFMKQQRTDEQYAYILSHALVTFWIEKVPRQILRDFVLSFQNKDDSSIVSERIDK VYTGGFKQFEKDFEAFCK
Sequences:
>Translated_258_residues MRIFYLILCFICLCDLLHAQTVRISYEGDPLTDKERRKIEQTLQYEVEFYAQFGLPDTLNLQLTVFNKREDALVYLNKFN IHPPKSTNGMYISRLQKAIILSREKEYQQGLGVIYHELSHHLTLQITAGRPPIWFNEGLAEYFEHCKVNKKGLQHTFTDY EKGRIRTIYMLGDIDLLTFINSRQKEFMKQQRTDEQYAYILSHALVTFWIEKVPRQILRDFVLSFQNKDDSSIVSERIDK VYTGGFKQFEKDFEAFCK >Mature_258_residues MRIFYLILCFICLCDLLHAQTVRISYEGDPLTDKERRKIEQTLQYEVEFYAQFGLPDTLNLQLTVFNKREDALVYLNKFN IHPPKSTNGMYISRLQKAIILSREKEYQQGLGVIYHELSHHLTLQITAGRPPIWFNEGLAEYFEHCKVNKKGLQHTFTDY EKGRIRTIYMLGDIDLLTFINSRQKEFMKQQRTDEQYAYILSHALVTFWIEKVPRQILRDFVLSFQNKDDSSIVSERIDK VYTGGFKQFEKDFEAFCK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30624; Mature: 30624
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIFYLILCFICLCDLLHAQTVRISYEGDPLTDKERRKIEQTLQYEVEFYAQFGLPDTLN CHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCE LQLTVFNKREDALVYLNKFNIHPPKSTNGMYISRLQKAIILSREKEYQQGLGVIYHELSH EEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HLTLQITAGRPPIWFNEGLAEYFEHCKVNKKGLQHTFTDYEKGRIRTIYMLGDIDLLTFI CEEEEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH NSRQKEFMKQQRTDEQYAYILSHALVTFWIEKVPRQILRDFVLSFQNKDDSSIVSERIDK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VYTGGFKQFEKDFEAFCK HHCCCHHHHHHHHHHHCC >Mature Secondary Structure MRIFYLILCFICLCDLLHAQTVRISYEGDPLTDKERRKIEQTLQYEVEFYAQFGLPDTLN CHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCE LQLTVFNKREDALVYLNKFNIHPPKSTNGMYISRLQKAIILSREKEYQQGLGVIYHELSH EEEEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HLTLQITAGRPPIWFNEGLAEYFEHCKVNKKGLQHTFTDYEKGRIRTIYMLGDIDLLTFI CEEEEEECCCCCCEEHHHHHHHHHHCCCCHHHHHHHHCCCCCCCEEEEEEECCHHHHHHH NSRQKEFMKQQRTDEQYAYILSHALVTFWIEKVPRQILRDFVLSFQNKDDSSIVSERIDK HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VYTGGFKQFEKDFEAFCK HHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA