| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is crcB
Identifier: 29349982
GI number: 29349982
Start: 5995271
End: 5995645
Strand: Reverse
Name: crcB
Synonym: BT_4574
Alternate gene names: 29349982
Gene position: 5995645-5995271 (Counterclockwise)
Preceding gene: 29349983
Following gene: 29349981
Centisome position: 95.77
GC content: 42.4
Gene sequence:
>375_bases ATGCTCAAGACTTTACTCTTTATCGGTATGGGAAGTTTTACCGGAGGCGTTCTGCGTTATCTCATCTCGCGTTACGTTCA GAATTTCTTGACACCTTCCTTCCCTTTGGGAACACTTCTGGTCAATGTACTCGGTTGTTTCGCCATCGGCCTGTTTTACG GACTCTTCGAACGGGGAAATCTGATGAACCCCAATCTGAGAATGTTTCTCACCGTAGGATTCTGTGGAGGATTCACCACC TTTTCAACCTTCATGAATGAGAACTTTCAGTTAATCAAAGACGATAATTTCTTCTACCTCTCACTCTATGTAGGCCTCAG CTTGTTTGTAGGATTCATTATGCTGTACTTGGGATATTCACTTGTAAAACAATAA
Upstream 100 bases:
>100_bases TTTTTTCTATCTTTGCACCGGCTATGGGATTAGCCTTTAACCGCCCTTTGGAGCTGATGATCCCTACAATTTGAATGTAT AACTCTTAAATTGTCAGCTT
Downstream 100 bases:
>100_bases ACATAACATATCTACATCATATGATCAAAAGAAATGCAGCCAAGCCCGTCCGTGTGGCTCCTCCCATGATGGAGGAACAG GAAGTCAGTACAAGCACCTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 124
Protein sequence:
>124_residues MLKTLLFIGMGSFTGGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFERGNLMNPNLRMFLTVGFCGGFTT FSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYSLVKQ
Sequences:
>Translated_124_residues MLKTLLFIGMGSFTGGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFERGNLMNPNLRMFLTVGFCGGFTT FSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYSLVKQ >Mature_124_residues MLKTLLFIGMGSFTGGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFERGNLMNPNLRMFLTVGFCGGFTT FSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYSLVKQ
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family
Homologues:
Organism=Escherichia coli, GI1786842, Length=122, Percent_Identity=40.1639344262295, Blast_Score=76, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CRCB_BACTN (Q89Z03)
Other databases:
- EMBL: AE015928 - RefSeq: NP_813485.1 - GeneID: 1073351 - GenomeReviews: AE015928_GR - KEGG: bth:BT_4574 - NMPDR: fig|226186.1.peg.4572 - HOGENOM: HBG753179 - OMA: SNWFKKR - PhylomeDB: Q89Z03 - ProtClustDB: CLSK824000 - BioCyc: BTHE226186:BT_4574-MONOMER - HAMAP: MF_00454 - InterPro: IPR003691 - TIGRFAMs: TIGR00494
Pfam domain/function: PF02537 CRCB
EC number: NA
Molecular weight: Translated: 14049; Mature: 14049
Theoretical pI: Translated: 9.08; Mature: 9.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x14a82778)-; HASH(0x14e306b0)-; HASH(0x14cfadc8)-; HASH(0x148bad8c)-;
Cys/Met content:
1.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLKTLLFIGMGSFTGGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFERGN CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LMNPNLRMFLTVGFCGGFTTFSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYS CCCCCCEEEEEEEHHCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHH LVKQ HHCH >Mature Secondary Structure MLKTLLFIGMGSFTGGVLRYLISRYVQNFLTPSFPLGTLLVNVLGCFAIGLFYGLFERGN CCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCC LMNPNLRMFLTVGFCGGFTTFSTFMNENFQLIKDDNFFYLSLYVGLSLFVGFIMLYLGYS CCCCCCEEEEEEEHHCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHH LVKQ HHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12663928