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The map label for this gene is yisX [H]

Identifier: 29349981

GI number: 29349981

Start: 5994588

End: 5995250

Strand: Reverse

Name: yisX [H]

Synonym: BT_4573

Alternate gene names: 29349981

Gene position: 5995250-5994588 (Counterclockwise)

Preceding gene: 29349982

Following gene: 29349980

Centisome position: 95.77

GC content: 46.3

Gene sequence:

>663_bases
ATGATCAAAAGAAATGCAGCCAAGCCCGTCCGTGTGGCTCCTCCCATGATGGAGGAACAGGAAGTCAGTACAAGCACCTT
GCAAGAACTGCTCGAAAAAGAGGAAACCGTCTCAAATCTCATATTCAGCAAAGGAAGAGAAGAGGGAATCAGCAAGTCTT
ACAAGAGTTTCAAGAACTGCACTTTCCGGAATCAGACATTCAGCGAATGTAAATTCCGTTCTTCTCAGCTGGCAGATATA
CGGTTTGAGAACTGCGACCTGTCCAATATATCTTTTGCAGAAAGCTCCCTTTACCGGGTAGAGTTCATTGCCTGCAAATT
ACTAGGAACCAACCTTTCAGAGACGACCATGAATCATGTTTTATTGCATGACTGTAATGCCTCTTACATCAATCTGGCGA
TGAGCAAAATGAATCAGGTACGCTTCTCGCACTGCCATTTCCGGAACGGAAGTTTCAATGACTGCCGTTTCTCTTCCGTC
GCCTTCGACAGTTGTGATTTGGTAGAAGCTGACTTTTCTCATGCTCCGCTCCGTGGAATCGACCTGCGTACTTCGCGCAT
CGGCGGAATAACACTTAATATCAGCGACCTGAAAGGAGCTGTCATTACTTCCTTGCAGGCCATGGACTTGCTTCCGCTGT
TGGGAGTTATTATCGAAGACTAG

Upstream 100 bases:

>100_bases
ACCTCTCACTCTATGTAGGCCTCAGCTTGTTTGTAGGATTCATTATGCTGTACTTGGGATATTCACTTGTAAAACAATAA
ACATAACATATCTACATCAT

Downstream 100 bases:

>100_bases
AATTCTACCAATTTCATCCATCCGCATTCAAACAAAAAGCATCGTCACATTGTTATTTAATAAGACCGGACTAATGACAT
CTAGGGAGTATGATTCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MIKRNAAKPVRVAPPMMEEQEVSTSTLQELLEKEETVSNLIFSKGREEGISKSYKSFKNCTFRNQTFSECKFRSSQLADI
RFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHVLLHDCNASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSV
AFDSCDLVEADFSHAPLRGIDLRTSRIGGITLNISDLKGAVITSLQAMDLLPLLGVIIED

Sequences:

>Translated_220_residues
MIKRNAAKPVRVAPPMMEEQEVSTSTLQELLEKEETVSNLIFSKGREEGISKSYKSFKNCTFRNQTFSECKFRSSQLADI
RFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHVLLHDCNASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSV
AFDSCDLVEADFSHAPLRGIDLRTSRIGGITLNISDLKGAVITSLQAMDLLPLLGVIIED
>Mature_220_residues
MIKRNAAKPVRVAPPMMEEQEVSTSTLQELLEKEETVSNLIFSKGREEGISKSYKSFKNCTFRNQTFSECKFRSSQLADI
RFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHVLLHDCNASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSV
AFDSCDLVEADFSHAPLRGIDLRTSRIGGITLNISDLKGAVITSLQAMDLLPLLGVIIED

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646
- InterPro:   IPR012334 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 24712; Mature: 24712

Theoretical pI: Translated: 6.35; Mature: 6.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.6 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRNAAKPVRVAPPMMEEQEVSTSTLQELLEKEETVSNLIFSKGREEGISKSYKSFKNC
CCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TFRNQTFSECKFRSSQLADIRFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHV
CCCCCCHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHEEEHHHCCCCHHHHHHHE
LLHDCNASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSVAFDSCDLVEADFSHAPLRGI
EEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCC
DLRTSRIGGITLNISDLKGAVITSLQAMDLLPLLGVIIED
EEECCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIKRNAAKPVRVAPPMMEEQEVSTSTLQELLEKEETVSNLIFSKGREEGISKSYKSFKNC
CCCCCCCCCEEECCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCC
TFRNQTFSECKFRSSQLADIRFENCDLSNISFAESSLYRVEFIACKLLGTNLSETTMNHV
CCCCCCHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHEEEHHHCCCCHHHHHHHE
LLHDCNASYINLAMSKMNQVRFSHCHFRNGSFNDCRFSSVAFDSCDLVEADFSHAPLRGI
EEECCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCEEECCCCCCEECCCCCCCCCCC
DLRTSRIGGITLNISDLKGAVITSLQAMDLLPLLGVIIED
EEECCCCCEEEEEHHHHCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]