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The map label for this gene is yehT [H]

Identifier: 29349974

GI number: 29349974

Start: 5986543

End: 5987247

Strand: Reverse

Name: yehT [H]

Synonym: BT_4566

Alternate gene names: 29349974

Gene position: 5987247-5986543 (Counterclockwise)

Preceding gene: 29349975

Following gene: 29349973

Centisome position: 95.64

GC content: 36.03

Gene sequence:

>705_bases
ATGAAAATAAAATGTATCATTACAGATGATGAACCTATAGCAAGAAAAGGCTTGCGAGGGTATATCGAAAAAGTAGATTT
CCTCACCTTGACCGGAGAGTGTGAAGATGCCGTCCAACTAAATACAATACTGAAGACCCAAGAAATAGACCTTCTGTTTC
TTGATATCGAAATGCCCGAAATGACAGGTATAGAACTGTTGTCTAATCTAACAAATCCGCCCAAAGTTATTATTGTATCA
GCTTATGAACAATACGCCCTAAAAGGATATGAGTTTAATGTAGTGGATTATCTTTTAAAACCTGTATCTTTCGATCGTTT
TATCAAATCTGTCAACAAAATCTACGATTTGTTACAAACGGAGCAAAAAGAAAAGAATGATTATATATTTGTGAAGAGCA
ACAAACTATTAAAAAAGATTCTGTTCAAGGATATTCTCTACATTGAAAGCATGGAAAACTATGTTGTCATTCAGACAGTC
TCATGCAAGGAAGTAGTGTATACTACTCTGAAACAACTCAATGATTCATTGCCGAAGGATGTTTTTCAACAGACTCACCG
CTCATATATTGTGAATCTTGAAAAGGTTACTGCTATTGACGGCAATCAGCTGACCCTCTCCTCTTACAAAATACCAGTAG
CCCGGACCTTCAGAGACAGTATCTTCAACCTGATACTGAATAACCGGCTAATAATCAAAAGCTAA

Upstream 100 bases:

>100_bases
AAACGCCGGCTTGACCTTCTGTATCCTGAAAAATACAGCTTAGACTTCAAACAAACAGACCATATGTTTATCGCTAAATT
AACCATAAACACTGATTGAT

Downstream 100 bases:

>100_bases
ACCGGAGCGACACAGGATATAAAAGAAAAAGCATCCAAGTAAAATACCTGAATGCTTTTTTCTTTCTGAGCCTCTTGTCG
GATTCGAACCAACGACCCCG

Product: two-component system response regulator protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKIKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPEMTGIELLSNLTNPPKVIIVS
AYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQTEQKEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTV
SCKEVVYTTLKQLNDSLPKDVFQQTHRSYIVNLEKVTAIDGNQLTLSSYKIPVARTFRDSIFNLILNNRLIIKS

Sequences:

>Translated_234_residues
MKIKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPEMTGIELLSNLTNPPKVIIVS
AYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQTEQKEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTV
SCKEVVYTTLKQLNDSLPKDVFQQTHRSYIVNLEKVTAIDGNQLTLSSYKIPVARTFRDSIFNLILNNRLIIKS
>Mature_234_residues
MKIKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPEMTGIELLSNLTNPPKVIIVS
AYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQTEQKEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTV
SCKEVVYTTLKQLNDSLPKDVFQQTHRSYIVNLEKVTAIDGNQLTLSSYKIPVARTFRDSIFNLILNNRLIIKS

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI87082052, Length=240, Percent_Identity=28.75, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788724, Length=234, Percent_Identity=26.0683760683761, Blast_Score=89, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR007492
- InterPro:   IPR001789 [H]

Pfam domain/function: PF04397 LytTR; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 27124; Mature: 27124

Theoretical pI: Translated: 6.06; Mature: 6.06

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPE
CEEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEECCCEEEEEEECCCC
MTGIELLSNLTNPPKVIIVSAYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQT
CHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EQKEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTVSCKEVVYTTLKQLNDSLPKD
HHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHH
VFQQTHRSYIVNLEKVTAIDGNQLTLSSYKIPVARTFRDSIFNLILNNRLIIKS
HHHHHHHHHEEEHHHEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure
MKIKCIITDDEPIARKGLRGYIEKVDFLTLTGECEDAVQLNTILKTQEIDLLFLDIEMPE
CEEEEEEECCCHHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHEECCCEEEEEEECCCC
MTGIELLSNLTNPPKVIIVSAYEQYALKGYEFNVVDYLLKPVSFDRFIKSVNKIYDLLQT
CHHHHHHHCCCCCCEEEEEECHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHH
EQKEKNDYIFVKSNKLLKKILFKDILYIESMENYVVIQTVSCKEVVYTTLKQLNDSLPKD
HHCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHCCCCHH
VFQQTHRSYIVNLEKVTAIDGNQLTLSSYKIPVARTFRDSIFNLILNNRLIIKS
HHHHHHHHHEEEHHHEEEECCCEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11111050; 11206551; 11258796 [H]