Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349971

Identifier: 29349971

GI number: 29349971

Start: 5983989

End: 5984540

Strand: Reverse

Name: 29349971

Synonym: BT_4563

Alternate gene names: NA

Gene position: 5984540-5983989 (Counterclockwise)

Preceding gene: 29349972

Following gene: 29349970

Centisome position: 95.59

GC content: 36.41

Gene sequence:

>552_bases
ATGAAGAATTTAATTCGTATCTTTTTAATAGTAGTAATTGTTGGTGCAGGTATAAGCATCGGCAGTTCGTGTTCGGACGA
AAATGATTGCTCGCTGGCGGGACGCCCCATGATGTACTGCACATTGTACACAATTGACGAGATAACCGATCTCAGGGTAA
ATGACACACTGGACTCATTAACAATTACAGCATTGGGAACAGACTCAATCATTCTCAACAACCAGAAAAAAGTACATACG
CTGATGTTACCGTTACGCTATACCAGCGATACTACTGTATTTATACTCTGGTACAATCCGAATAGTCCTACTAACAAAAA
AGATGTTGATACATTATATATTATACAAAAAAACACACCGTATTTTCAATCAATGGAATGCGGATATATGATGAAGCAGA
ACATTCTCAGTACCAAATTTGGAAATACCAAAAATAGTTCGGAAAGAATAGATTCTCTACATATACAAAATAAAGAAGCC
AATACAAATGAAATTGAGAATTTACAAATATTCTATAGATATCGCGACCGCACGCCTCCTACGATTGAGTAG

Upstream 100 bases:

>100_bases
TCCTTGCCGGATTCCTGGGAGAACTGATCTCACGTAATGCCCCCGAACGGAACAATTATCAGATAGAAAAGAAAATTTAA
TTCACGCCCAATAACCGATT

Downstream 100 bases:

>100_bases
TGTGCTACTCCTCTTTTGTATTGGAATCCCGACAATTGCTCAACAACAACGACCGACTCCCGTACAAAAAAGAGACCAGA
AGAAGAAAGAGGCTGTAGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 183; Mature: 183

Protein sequence:

>183_residues
MKNLIRIFLIVVIVGAGISIGSSCSDENDCSLAGRPMMYCTLYTIDEITDLRVNDTLDSLTITALGTDSIILNNQKKVHT
LMLPLRYTSDTTVFILWYNPNSPTNKKDVDTLYIIQKNTPYFQSMECGYMMKQNILSTKFGNTKNSSERIDSLHIQNKEA
NTNEIENLQIFYRYRDRTPPTIE

Sequences:

>Translated_183_residues
MKNLIRIFLIVVIVGAGISIGSSCSDENDCSLAGRPMMYCTLYTIDEITDLRVNDTLDSLTITALGTDSIILNNQKKVHT
LMLPLRYTSDTTVFILWYNPNSPTNKKDVDTLYIIQKNTPYFQSMECGYMMKQNILSTKFGNTKNSSERIDSLHIQNKEA
NTNEIENLQIFYRYRDRTPPTIE
>Mature_183_residues
MKNLIRIFLIVVIVGAGISIGSSCSDENDCSLAGRPMMYCTLYTIDEITDLRVNDTLDSLTITALGTDSIILNNQKKVHT
LMLPLRYTSDTTVFILWYNPNSPTNKKDVDTLYIIQKNTPYFQSMECGYMMKQNILSTKFGNTKNSSERIDSLHIQNKEA
NTNEIENLQIFYRYRDRTPPTIE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20938; Mature: 20938

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLIRIFLIVVIVGAGISIGSSCSDENDCSLAGRPMMYCTLYTIDEITDLRVNDTLDSL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCE
TITALGTDSIILNNQKKVHTLMLPLRYTSDTTVFILWYNPNSPTNKKDVDTLYIIQKNTP
EEEEECCCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC
YFQSMECGYMMKQNILSTKFGNTKNSSERIDSLHIQNKEANTNEIENLQIFYRYRDRTPP
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCEEEEEEEEECCCCC
TIE
CCC
>Mature Secondary Structure
MKNLIRIFLIVVIVGAGISIGSSCSDENDCSLAGRPMMYCTLYTIDEITDLRVNDTLDSL
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEECCCCCCE
TITALGTDSIILNNQKKVHTLMLPLRYTSDTTVFILWYNPNSPTNKKDVDTLYIIQKNTP
EEEEECCCEEEECCCCEEEEEEEEEEECCCCEEEEEEECCCCCCCCCCCEEEEEEECCCC
YFQSMECGYMMKQNILSTKFGNTKNSSERIDSLHIQNKEANTNEIENLQIFYRYRDRTPP
CCCCCCCCHHHHHHHHHHCCCCCCCCHHHHHEEEEECCCCCCCCCCEEEEEEEEECCCCC
TIE
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA