Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349970

Identifier: 29349970

GI number: 29349970

Start: 5983259

End: 5983825

Strand: Reverse

Name: 29349970

Synonym: BT_4562

Alternate gene names: NA

Gene position: 5983825-5983259 (Counterclockwise)

Preceding gene: 29349971

Following gene: 29349969

Centisome position: 95.58

GC content: 42.86

Gene sequence:

>567_bases
ATGCTAGGTGGCGACTTCATGAGTTCCGAAGTCAGCATAGGCGTCAACCTTAAAAACAAGTTTATCCCGACCATCGAGTT
TGGTATGGGAGGAACAGATACATGGAATGAAACGGGAATACACTACAAAAGTAAGACCGCCCCATTCTTCCGGATTGGTG
TAGACTATAATACGATGGCAAAGAAAAAGGAGAAAAACAGCTATCTATATGTAGGTCTCCGCTATGCGTTCAGTTCATTC
AAGTATGATGTATCGACCCTGCCGGTTGACGATCCGATTTGGGGAGGAAGTATCGGAAATCCGAGTCTGGAAGACGACTA
CTGGGGAGGAAGCGTTCCTTTCAGTCATTTAGGGATGAAAGGGTCTATGCAGTGGTTTGAATTAGTGGTAGGTGTCAAAG
TACGCATTTACAAGAATTTCAATATGGGCTGGTCTGTACGCATGAAATATAAGACAAATGCTTCGACCAATGAATACGCC
AACCCTTGGTATGTGCCCGGCTACGGAAAATTTAAATCAAATAACATGGGAATTACCTATTCCCTCATTTACAAATTACC
TCTTTAA

Upstream 100 bases:

>100_bases
ACAAAAAAGAGACCAGAAGAAGAAAGAGGCTGTAGTCGATACCATCCCGTTTTATAATGGGACGTATGTCGGTGTGGACA
TATACGGCATCGGAAGTAAA

Downstream 100 bases:

>100_bases
AGAATAATGACAGGACTAGAGATTTGGCTGCTTGCAATAGGCTTAGCGATGGATTGTTTCGCTGTTTCAATTGCAAGCGG
TATTATTTTGAAACGTACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF
KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA
NPWYVPGYGKFKSNNMGITYSLIYKLPL

Sequences:

>Translated_188_residues
MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF
KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA
NPWYVPGYGKFKSNNMGITYSLIYKLPL
>Mature_188_residues
MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF
KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA
NPWYVPGYGKFKSNNMGITYSLIYKLPL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21318; Mature: 21318

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMA
CCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCHHHH
KKKEKNSYLYVGLRYAFSSFKYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMK
HHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYANPWYVPGYGKFKSNNMGITY
CCHHHEEEEECEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE
SLIYKLPL
EEEEEECC
>Mature Secondary Structure
MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMA
CCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCHHHH
KKKEKNSYLYVGLRYAFSSFKYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMK
HHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC
GSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYANPWYVPGYGKFKSNNMGITY
CCHHHEEEEECEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE
SLIYKLPL
EEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA