| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
Click here to switch to the map view.
The map label for this gene is 29349970
Identifier: 29349970
GI number: 29349970
Start: 5983259
End: 5983825
Strand: Reverse
Name: 29349970
Synonym: BT_4562
Alternate gene names: NA
Gene position: 5983825-5983259 (Counterclockwise)
Preceding gene: 29349971
Following gene: 29349969
Centisome position: 95.58
GC content: 42.86
Gene sequence:
>567_bases ATGCTAGGTGGCGACTTCATGAGTTCCGAAGTCAGCATAGGCGTCAACCTTAAAAACAAGTTTATCCCGACCATCGAGTT TGGTATGGGAGGAACAGATACATGGAATGAAACGGGAATACACTACAAAAGTAAGACCGCCCCATTCTTCCGGATTGGTG TAGACTATAATACGATGGCAAAGAAAAAGGAGAAAAACAGCTATCTATATGTAGGTCTCCGCTATGCGTTCAGTTCATTC AAGTATGATGTATCGACCCTGCCGGTTGACGATCCGATTTGGGGAGGAAGTATCGGAAATCCGAGTCTGGAAGACGACTA CTGGGGAGGAAGCGTTCCTTTCAGTCATTTAGGGATGAAAGGGTCTATGCAGTGGTTTGAATTAGTGGTAGGTGTCAAAG TACGCATTTACAAGAATTTCAATATGGGCTGGTCTGTACGCATGAAATATAAGACAAATGCTTCGACCAATGAATACGCC AACCCTTGGTATGTGCCCGGCTACGGAAAATTTAAATCAAATAACATGGGAATTACCTATTCCCTCATTTACAAATTACC TCTTTAA
Upstream 100 bases:
>100_bases ACAAAAAAGAGACCAGAAGAAGAAAGAGGCTGTAGTCGATACCATCCCGTTTTATAATGGGACGTATGTCGGTGTGGACA TATACGGCATCGGAAGTAAA
Downstream 100 bases:
>100_bases AGAATAATGACAGGACTAGAGATTTGGCTGCTTGCAATAGGCTTAGCGATGGATTGTTTCGCTGTTTCAATTGCAAGCGG TATTATTTTGAAACGTACTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 188; Mature: 188
Protein sequence:
>188_residues MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA NPWYVPGYGKFKSNNMGITYSLIYKLPL
Sequences:
>Translated_188_residues MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA NPWYVPGYGKFKSNNMGITYSLIYKLPL >Mature_188_residues MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMAKKKEKNSYLYVGLRYAFSSF KYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMKGSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYA NPWYVPGYGKFKSNNMGITYSLIYKLPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21318; Mature: 21318
Theoretical pI: Translated: 9.68; Mature: 9.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMA CCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCHHHH KKKEKNSYLYVGLRYAFSSFKYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMK HHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC GSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYANPWYVPGYGKFKSNNMGITY CCHHHEEEEECEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE SLIYKLPL EEEEEECC >Mature Secondary Structure MLGGDFMSSEVSIGVNLKNKFIPTIEFGMGGTDTWNETGIHYKSKTAPFFRIGVDYNTMA CCCCCCCCCEEEEEEEECCCCCCEEEECCCCCCCCCCCCCEEECCCCCEEEEECCCHHHH KKKEKNSYLYVGLRYAFSSFKYDVSTLPVDDPIWGGSIGNPSLEDDYWGGSVPFSHLGMK HHCCCCCEEEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCC GSMQWFELVVGVKVRIYKNFNMGWSVRMKYKTNASTNEYANPWYVPGYGKFKSNNMGITY CCHHHEEEEECEEEEEEEECCCCEEEEEEEECCCCCCCCCCCEEECCCCCCCCCCCCEEE SLIYKLPL EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA