Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349965

Identifier: 29349965

GI number: 29349965

Start: 5978777

End: 5980204

Strand: Reverse

Name: 29349965

Synonym: BT_4557

Alternate gene names: NA

Gene position: 5980204-5978777 (Counterclockwise)

Preceding gene: 29349968

Following gene: 29349964

Centisome position: 95.52

GC content: 42.37

Gene sequence:

>1428_bases
ATGAAAAGAAAATATATTCTATTTATAATTTGCAGTTTCTTCCTCGGAGGAGTATCTGCACAAACATTGGAACAGGCACG
CACCTTATTTACAAAAGGTGACTACGAACAAGCCAAACCCGTATTTCAGAAATATGCCAAATCTCAACCATCCAATGGTA
ACTACAGCTATTGGTACGGTGTCTGCTGCCTGAAAACCGGAGAACCGGAAGAAGCCGTGAAGTATCTCGAAACCGCTGTA
AAAAGACGGGTAGCCGGTGGACAACTCTATCTGGGACAAGCTTACAATGATACTTATCGTTTCGAAGATGCAGTCAACTG
CTTTGAAGAATATATCGCCGACCTCAGCAAACGCAAAAGATCGACGGAAGAAGCTGAAGCTCTATTGGAAAAGAGCAAAG
CTGACCTGCGTATGCTCAAAGGAGTAGAAGACGTGTGCATTATTGACAGTTTCGTGGTAGATAAAGCAAATTTCCTGAGC
GCATACAAGATCAGTGAAGAGTCTGGCAAGCTATTTACATTCAACGAATTCTTCCAGACCGAAGGAGATCATCCGGGAAC
AGTTTATGAAACAGAAATCGGTAATAAAATCTATTATAGCGAAAAGGGAGAAAGAGGCAATCTGGATATATTCTCCAAAA
ATAAATTACTGAATGAATGGAGCAACGGTCGCCCGTTGCCCGGCAGCATCAACGAATCCGGAAACGCCAACTACCCGTTT
GTTTTATCGGATGGTGTTACTATTTATTATGCAACCGATGGCGAAGGACTGGGAGGATATGATATTTTTGTCACTCGTTA
CAACACAAATACGGACTCTTATCTGACGCCGGAAAATGTGGGAATGCCGTTCAATTCACCTTATAATGATTATATGTACG
TCATCGACGAATACAATAATCTGGGTTGGTTTGCCTCCGACCGTTTCCAGCCCGAAGAGAAAGTCTGCATCTATGTATTC
ATTCCTAATTCGTCTAAACAGACTTATAATTATGAGGCGATGGACCCGCAGCAGATGATCCGTCTGGCACAGATTCATTC
GCTGAAGGAAACTTGGAAAGATGAAAATACAGTAACGGAGGCACTGCAACGTCTGAAAGAGGCAATCAATCATAAGCCAC
AGGAACGTCGTGTGGTTGATTTCGAGTTTGTCATCGATGATAGCACGACCTATTATCAGTTGAGTGACTTCAAATCACCC
AAAGCAAAGCTACTGTTCCAAAGTTACCGGCAACTGGAAAAAGATTATCTGCAACAGGAAGATAAACTGAACGGTCTGCG
CCAGCAATATGCAAGCGCCAATCAACAAGGAAAAGAAAAACTTGCTCCCGCAATCCTTGATCTGGAAAAAAGAATTCTGC
AAATGAATGAAGAGCTGGATGCTCTTGGAGTAAGTGTGCGTAATGCCGAAAAAACAAAATCAAAATAA

Upstream 100 bases:

>100_bases
ATTTAAAGAAGAATTAACATAATAGAATCTCTGAAAAAGGGTTTATTTCTAATAAATTTGTACTTTTGAACAATTGATGC
ATGGATTAGTGAATAAAACA

Downstream 100 bases:

>100_bases
TACAGAGTTATGGACATACTGATTATCACCGTTCTCATCATTGCTGCAGTAATACTATTTTTGGTTGAACTGTTTGTCAT
TCCGGGGATTAGCCTGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MKRKYILFIICSFFLGGVSAQTLEQARTLFTKGDYEQAKPVFQKYAKSQPSNGNYSYWYGVCCLKTGEPEEAVKYLETAV
KRRVAGGQLYLGQAYNDTYRFEDAVNCFEEYIADLSKRKRSTEEAEALLEKSKADLRMLKGVEDVCIIDSFVVDKANFLS
AYKISEESGKLFTFNEFFQTEGDHPGTVYETEIGNKIYYSEKGERGNLDIFSKNKLLNEWSNGRPLPGSINESGNANYPF
VLSDGVTIYYATDGEGLGGYDIFVTRYNTNTDSYLTPENVGMPFNSPYNDYMYVIDEYNNLGWFASDRFQPEEKVCIYVF
IPNSSKQTYNYEAMDPQQMIRLAQIHSLKETWKDENTVTEALQRLKEAINHKPQERRVVDFEFVIDDSTTYYQLSDFKSP
KAKLLFQSYRQLEKDYLQQEDKLNGLRQQYASANQQGKEKLAPAILDLEKRILQMNEELDALGVSVRNAEKTKSK

Sequences:

>Translated_475_residues
MKRKYILFIICSFFLGGVSAQTLEQARTLFTKGDYEQAKPVFQKYAKSQPSNGNYSYWYGVCCLKTGEPEEAVKYLETAV
KRRVAGGQLYLGQAYNDTYRFEDAVNCFEEYIADLSKRKRSTEEAEALLEKSKADLRMLKGVEDVCIIDSFVVDKANFLS
AYKISEESGKLFTFNEFFQTEGDHPGTVYETEIGNKIYYSEKGERGNLDIFSKNKLLNEWSNGRPLPGSINESGNANYPF
VLSDGVTIYYATDGEGLGGYDIFVTRYNTNTDSYLTPENVGMPFNSPYNDYMYVIDEYNNLGWFASDRFQPEEKVCIYVF
IPNSSKQTYNYEAMDPQQMIRLAQIHSLKETWKDENTVTEALQRLKEAINHKPQERRVVDFEFVIDDSTTYYQLSDFKSP
KAKLLFQSYRQLEKDYLQQEDKLNGLRQQYASANQQGKEKLAPAILDLEKRILQMNEELDALGVSVRNAEKTKSK
>Mature_475_residues
MKRKYILFIICSFFLGGVSAQTLEQARTLFTKGDYEQAKPVFQKYAKSQPSNGNYSYWYGVCCLKTGEPEEAVKYLETAV
KRRVAGGQLYLGQAYNDTYRFEDAVNCFEEYIADLSKRKRSTEEAEALLEKSKADLRMLKGVEDVCIIDSFVVDKANFLS
AYKISEESGKLFTFNEFFQTEGDHPGTVYETEIGNKIYYSEKGERGNLDIFSKNKLLNEWSNGRPLPGSINESGNANYPF
VLSDGVTIYYATDGEGLGGYDIFVTRYNTNTDSYLTPENVGMPFNSPYNDYMYVIDEYNNLGWFASDRFQPEEKVCIYVF
IPNSSKQTYNYEAMDPQQMIRLAQIHSLKETWKDENTVTEALQRLKEAINHKPQERRVVDFEFVIDDSTTYYQLSDFKSP
KAKLLFQSYRQLEKDYLQQEDKLNGLRQQYASANQQGKEKLAPAILDLEKRILQMNEELDALGVSVRNAEKTKSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54685; Mature: 54685

Theoretical pI: Translated: 4.86; Mature: 4.86

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKYILFIICSFFLGGVSAQTLEQARTLFTKGDYEQAKPVFQKYAKSQPSNGNYSYWYG
CCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE
VCCLKTGEPEEAVKYLETAVKRRVAGGQLYLGQAYNDTYRFEDAVNCFEEYIADLSKRKR
EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
STEEAEALLEKSKADLRMLKGVEDVCIIDSFVVDKANFLSAYKISEESGKLFTFNEFFQT
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHEEECCCCCCEEEEHHHHHC
EGDHPGTVYETEIGNKIYYSEKGERGNLDIFSKNKLLNEWSNGRPLPGSINESGNANYPF
CCCCCCCEEEECCCCEEEECCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCE
VLSDGVTIYYATDGEGLGGYDIFVTRYNTNTDSYLTPENVGMPFNSPYNDYMYVIDEYNN
EEECCEEEEEEECCCCCCCEEEEEEEECCCCCCEECCHHCCCCCCCCCCCEEEEEECCCC
LGWFASDRFQPEEKVCIYVFIPNSSKQTYNYEAMDPQQMIRLAQIHSLKETWKDENTVTE
CCCEECCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHH
ALQRLKEAINHKPQERRVVDFEFVIDDSTTYYQLSDFKSPKAKLLFQSYRQLEKDYLQQE
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DKLNGLRQQYASANQQGKEKLAPAILDLEKRILQMNEELDALGVSVRNAEKTKSK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC
>Mature Secondary Structure
MKRKYILFIICSFFLGGVSAQTLEQARTLFTKGDYEQAKPVFQKYAKSQPSNGNYSYWYG
CCCCEEHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEEEE
VCCLKTGEPEEAVKYLETAVKRRVAGGQLYLGQAYNDTYRFEDAVNCFEEYIADLSKRKR
EEEEECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHC
STEEAEALLEKSKADLRMLKGVEDVCIIDSFVVDKANFLSAYKISEESGKLFTFNEFFQT
CHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHHHEEECCCCCCEEEEHHHHHC
EGDHPGTVYETEIGNKIYYSEKGERGNLDIFSKNKLLNEWSNGRPLPGSINESGNANYPF
CCCCCCCEEEECCCCEEEECCCCCCCCEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCE
VLSDGVTIYYATDGEGLGGYDIFVTRYNTNTDSYLTPENVGMPFNSPYNDYMYVIDEYNN
EEECCEEEEEEECCCCCCCEEEEEEEECCCCCCEECCHHCCCCCCCCCCCEEEEEECCCC
LGWFASDRFQPEEKVCIYVFIPNSSKQTYNYEAMDPQQMIRLAQIHSLKETWKDENTVTE
CCCEECCCCCCCCCEEEEEEECCCCCCCEEECCCCHHHHHHHHHHHHHHHHHCCCHHHHH
ALQRLKEAINHKPQERRVVDFEFVIDDSTTYYQLSDFKSPKAKLLFQSYRQLEKDYLQQE
HHHHHHHHHCCCCCCCEEEEEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH
DKLNGLRQQYASANQQGKEKLAPAILDLEKRILQMNEELDALGVSVRNAEKTKSK
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA