Definition Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome.
Accession NC_004663
Length 6,260,361

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The map label for this gene is 29349955

Identifier: 29349955

GI number: 29349955

Start: 5967594

End: 5967968

Strand: Reverse

Name: 29349955

Synonym: BT_4547

Alternate gene names: NA

Gene position: 5967968-5967594 (Counterclockwise)

Preceding gene: 29349956

Following gene: 29349954

Centisome position: 95.33

GC content: 43.73

Gene sequence:

>375_bases
ATGAACACAACAGATTTGACTTTTAATGACCTGCCCAAAGTGGTAGGCGAACTCTGCGAGAGAATCGCAGGAATGGAAAA
TTTACTTAGGGACACTCTTAACCGCCAAAGCGAACCAAAAGAGAATTTGCACGTACCAATGACAGTGCAGGAAGCCTGTG
CCTATCTGAAAATGCCAGTCTCCACCTTTTATTACAAGATAAAGAAGGACAACATTCCTGTTATCAAACAAGGAAAGCAC
CTTTATATCTATCGTGACGAGCTCGACAAATGGCTGGAGGCATCTCGCAAAACTTCAGTACCTCTCACCTATGAGGAAGA
AAACGAAGCGATGTATACCTCACACCGTCGCAAGCCTAATCCTAAAAACTGGTGA

Upstream 100 bases:

>100_bases
AAATTAAATCGTGCAGACGGTAATCATTGTTCTGCCTGACGAATTTCTGCAAAATTTCATTCTGTTGGTTTGCAGCATAT
TAATTCTAATTATTGAAGAT

Downstream 100 bases:

>100_bases
GTATGGAAACTGCAACACCCATTGAGGATTTTGCTCAAATCACTACGAGATGGCAAGATACTATGCTCAGTTTGGAAAAG
GTGTACGAACAGGAGCCGGA

Product: excisionase

Products: NA

Alternate protein names: Mobilizable Transposon Protein Xis Protein; Excisionase In Mobilizable Transposon; Excisionase In Mobilizable Transposon Xis Protein

Number of amino acids: Translated: 124; Mature: 124

Protein sequence:

>124_residues
MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH
LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW

Sequences:

>Translated_124_residues
MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH
LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW
>Mature_124_residues
MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPVSTFYYKIKKDNIPVIKQGKH
LYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPNPKNW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14650; Mature: 14650

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCH
STFYYKIKKDNIPVIKQGKHLYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPN
HHHEEECCCCCCCEEECCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCC
PKNW
CCCC
>Mature Secondary Structure
MNTTDLTFNDLPKVVGELCERIAGMENLLRDTLNRQSEPKENLHVPMTVQEACAYLKMPV
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCH
STFYYKIKKDNIPVIKQGKHLYIYRDELDKWLEASRKTSVPLTYEEENEAMYTSHRRKPN
HHHEEECCCCCCCEEECCCEEEEEHHHHHHHHHHHCCCCCCCEECCCCCHHHHHHCCCCC
PKNW
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA