| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349956
Identifier: 29349956
GI number: 29349956
Start: 5968069
End: 5968821
Strand: Reverse
Name: 29349956
Synonym: BT_4548
Alternate gene names: NA
Gene position: 5968821-5968069 (Counterclockwise)
Preceding gene: 29349957
Following gene: 29349955
Centisome position: 95.34
GC content: 41.04
Gene sequence:
>753_bases ATGGAGAATAATATACAAGTTCAGAAAGCAGCTGATATCAGCAGTTTGGCTGGAGTGGTCATCGTTTCACTCTCGGCACT CACCGCATACAATATCGGTGAAAAGTTCAATCACAACATCCTATTTGATGCCACCATTTTTATTATCTCTTTGGTAATGC TTATTTTGACCTTTGCCATATTCCGCAAAGTAATGGCAGGGCTTTTTACGACAATCTCAAGTAGTACTACAAATAAGCAA GTACAAAGCGAATGTTCACAAGAAAGCAGCCATCAAAATGCTAATCAAGATTCAGTAGAAGAGGAACAGATACCTGATAG TTTGGAGAGATATGAGAGCATTCTTGTGAAAGAGCAACTGAAGGAGGTGAAACGAAAAAGGGACACCATGATAGCTATCC GCGAATATGTAGTGGAAAAGACCTCGAAATATCTCTCAAAAGAGAATATCAGCACACTATTCCGGAATATAGAGTGCATT GCTGAAAACCGGGTTAACGATTGTCAGCCAATCCATTCAACGAAAGAAGCAAAGATCAGTTCTCCCTCTTTAAGACACTT AGCTTGGAATATCGGTGAACGGCTTGGAGTCTCCCGTCGCGACAGAGCGATATTCATTAAGTCTTCTTTCCCATACGAAT TGCGCAACGCTGATATAGAATATCTGGAAGCCAATTTGCGTGTTAATGTCCCATGCGACATTCCTATTGACGTGCCGGAC AAAGGAGATTTCCACTTTCACAACAATACTTGA
Upstream 100 bases:
>100_bases AATTATTTGTGAATATCAGTCCAATAACCATTAGTATTTATGGTTATATGGAAATTAGTGCTGAACTTTACGCCATAAAA TTGTAAACAATCACAACTAT
Downstream 100 bases:
>100_bases AAATTAAATCGTGCAGACGGTAATCATTGTTCTGCCTGACGAATTTCTGCAAAATTTCATTCTGTTGGTTTGCAGCATAT TAATTCTAATTATTGAAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 250
Protein sequence:
>250_residues MENNIQVQKAADISSLAGVVIVSLSALTAYNIGEKFNHNILFDATIFIISLVMLILTFAIFRKVMAGLFTTISSSTTNKQ VQSECSQESSHQNANQDSVEEEQIPDSLERYESILVKEQLKEVKRKRDTMIAIREYVVEKTSKYLSKENISTLFRNIECI AENRVNDCQPIHSTKEAKISSPSLRHLAWNIGERLGVSRRDRAIFIKSSFPYELRNADIEYLEANLRVNVPCDIPIDVPD KGDFHFHNNT
Sequences:
>Translated_250_residues MENNIQVQKAADISSLAGVVIVSLSALTAYNIGEKFNHNILFDATIFIISLVMLILTFAIFRKVMAGLFTTISSSTTNKQ VQSECSQESSHQNANQDSVEEEQIPDSLERYESILVKEQLKEVKRKRDTMIAIREYVVEKTSKYLSKENISTLFRNIECI AENRVNDCQPIHSTKEAKISSPSLRHLAWNIGERLGVSRRDRAIFIKSSFPYELRNADIEYLEANLRVNVPCDIPIDVPD KGDFHFHNNT >Mature_250_residues MENNIQVQKAADISSLAGVVIVSLSALTAYNIGEKFNHNILFDATIFIISLVMLILTFAIFRKVMAGLFTTISSSTTNKQ VQSECSQESSHQNANQDSVEEEQIPDSLERYESILVKEQLKEVKRKRDTMIAIREYVVEKTSKYLSKENISTLFRNIECI AENRVNDCQPIHSTKEAKISSPSLRHLAWNIGERLGVSRRDRAIFIKSSFPYELRNADIEYLEANLRVNVPCDIPIDVPD KGDFHFHNNT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28427; Mature: 28427
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENNIQVQKAADISSLAGVVIVSLSALTAYNIGEKFNHNILFDATIFIISLVMLILTFAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEHHHHHHHHHHHHHHHHHHH FRKVMAGLFTTISSSTTNKQVQSECSQESSHQNANQDSVEEEQIPDSLERYESILVKEQL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHH KEVKRKRDTMIAIREYVVEKTSKYLSKENISTLFRNIECIAENRVNDCQPIHSTKEAKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SPSLRHLAWNIGERLGVSRRDRAIFIKSSFPYELRNADIEYLEANLRVNVPCDIPIDVPD CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCEEEEECCEEECCCCCCCCCCC KGDFHFHNNT CCCCCCCCCC >Mature Secondary Structure MENNIQVQKAADISSLAGVVIVSLSALTAYNIGEKFNHNILFDATIFIISLVMLILTFAI CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEHHHHHHHHHHHHHHHHHHH FRKVMAGLFTTISSSTTNKQVQSECSQESSHQNANQDSVEEEQIPDSLERYESILVKEQL HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHCHHHHHHHHHHHHHHHH KEVKRKRDTMIAIREYVVEKTSKYLSKENISTLFRNIECIAENRVNDCQPIHSTKEAKIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC SPSLRHLAWNIGERLGVSRRDRAIFIKSSFPYELRNADIEYLEANLRVNVPCDIPIDVPD CCHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHCCCCEEEEECCEEECCCCCCCCCCC KGDFHFHNNT CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA