| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349936
Identifier: 29349936
GI number: 29349936
Start: 5945992
End: 5946576
Strand: Reverse
Name: 29349936
Synonym: BT_4528
Alternate gene names: NA
Gene position: 5946576-5945992 (Counterclockwise)
Preceding gene: 29349949
Following gene: 29349935
Centisome position: 94.99
GC content: 38.12
Gene sequence:
>585_bases ATGAACTATAAATTTGATGGCAGTAAGGTGTTCTTTACATCCGATACCCATTTTTATCATGGGAATATCATTCGTTTCTG CAACAGACCGTTTAAGGATGTGGAAGTGATGAATGAGACTATAATCTCCAATTGGAATAATACAGTCGGGCAGGATGATA TCGTGTTTCATCTGGGAGATTTCTGTCTTGGCGGTTCAGCCGAATGGACTAAAATCCTTGACAGGTTGAACGGAAAGATA TATCTGATTATGGGTAATCACGATTTGAAGAATATACGCCAAGGCTACATTGACAGATTTGAACATGTGGCAATGCAGAT GCACATAGAAATTGGCAAACAGAGGATATATTTGAATCATTATCCCTTTCTATGCTTTGATGGAGGATATAAAGATGTGT GGCAACTATTCGGACACGTTCACACAAGAAAGAACAACACCGGAATAGATGCTGCCCGGCTTCAGTATCTCTATCCAACG CAATATGATGTGGGAGTAGATAACAACAACTTTACCCCTGTTTCATTTCAACAAGTGAAGAGAATAATTGAAAATCAAGT GGGACAATTTAATAAGAATAAATGA
Upstream 100 bases:
>100_bases TGTGACAGTCGCCTTTGTGATGCTCTTCTGCCATTTCCGTCTGATGGGCTGTTGGTAACCGGATTATTAACGTGCAGTGA TGCACACAAATTGCAAAGAA
Downstream 100 bases:
>100_bases TAAGGAAGATTAACAATGAGTGAATATACTACCATTTATTTAAGATGCAAGGAGATACCTTTGTTGAAGTACAAAGAGCA TCCTTCGTATGAGGAATATC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 194
Protein sequence:
>194_residues MNYKFDGSKVFFTSDTHFYHGNIIRFCNRPFKDVEVMNETIISNWNNTVGQDDIVFHLGDFCLGGSAEWTKILDRLNGKI YLIMGNHDLKNIRQGYIDRFEHVAMQMHIEIGKQRIYLNHYPFLCFDGGYKDVWQLFGHVHTRKNNTGIDAARLQYLYPT QYDVGVDNNNFTPVSFQQVKRIIENQVGQFNKNK
Sequences:
>Translated_194_residues MNYKFDGSKVFFTSDTHFYHGNIIRFCNRPFKDVEVMNETIISNWNNTVGQDDIVFHLGDFCLGGSAEWTKILDRLNGKI YLIMGNHDLKNIRQGYIDRFEHVAMQMHIEIGKQRIYLNHYPFLCFDGGYKDVWQLFGHVHTRKNNTGIDAARLQYLYPT QYDVGVDNNNFTPVSFQQVKRIIENQVGQFNKNK >Mature_194_residues MNYKFDGSKVFFTSDTHFYHGNIIRFCNRPFKDVEVMNETIISNWNNTVGQDDIVFHLGDFCLGGSAEWTKILDRLNGKI YLIMGNHDLKNIRQGYIDRFEHVAMQMHIEIGKQRIYLNHYPFLCFDGGYKDVWQLFGHVHTRKNNTGIDAARLQYLYPT QYDVGVDNNNFTPVSFQQVKRIIENQVGQFNKNK
Specific function: Unknown
COG id: COG4186
COG function: function code R; Predicted phosphoesterase or phosphohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 22798; Mature: 22798
Theoretical pI: Translated: 8.10; Mature: 8.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNYKFDGSKVFFTSDTHFYHGNIIRFCNRPFKDVEVMNETIISNWNNTVGQDDIVFHLGD CCEEECCCEEEEECCCEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECC FCLGGSAEWTKILDRLNGKIYLIMGNHDLKNIRQGYIDRFEHVAMQMHIEIGKQRIYLNH CCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEC YPFLCFDGGYKDVWQLFGHVHTRKNNTGIDAARLQYLYPTQYDVGVDNNNFTPVSFQQVK CCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEECCCCCCCCCCCCHHHHH RIIENQVGQFNKNK HHHHHHHCCCCCCC >Mature Secondary Structure MNYKFDGSKVFFTSDTHFYHGNIIRFCNRPFKDVEVMNETIISNWNNTVGQDDIVFHLGD CCEEECCCEEEEECCCEEECCCCCEECCCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECC FCLGGSAEWTKILDRLNGKIYLIMGNHDLKNIRQGYIDRFEHVAMQMHIEIGKQRIYLNH CCCCCCCHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHEEECCEEEEEEC YPFLCFDGGYKDVWQLFGHVHTRKNNTGIDAARLQYLYPTQYDVGVDNNNFTPVSFQQVK CCEEEEECCHHHHHHHHHHHHCCCCCCCCCHHHEEEECCCCEECCCCCCCCCCCCHHHHH RIIENQVGQFNKNK HHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]