| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349935
Identifier: 29349935
GI number: 29349935
Start: 5945434
End: 5945976
Strand: Reverse
Name: 29349935
Synonym: BT_4527
Alternate gene names: NA
Gene position: 5945976-5945434 (Counterclockwise)
Preceding gene: 29349936
Following gene: 29349934
Centisome position: 94.98
GC content: 33.33
Gene sequence:
>543_bases ATGAGTGAATATACTACCATTTATTTAAGATGCAAGGAGATACCTTTGTTGAAGTACAAAGAGCATCCTTCGTATGAGGA ATATCAAAAGTTATCTAAGGAAGATTTAATGAAAGTTAATCGTGAGATTGATGAATATAACAAACAAGTCACCAAGTCTT TGGGATGTAAATTGTTTTATCTTAGCACTACTCCAAGCCGAGAGTTGACGATACTTCCATGGAGTCCTTCTCCGAGTATA CTAACCAAAGGCCTGCTTGATGAGATTCTTTATTTCTACCAAGAAGAGATTGATAATTACAAAAATGCTATTGCTAAAAA TAAAGAAGATATAGCCAAGTTGGAAGTCCGTATATCCAAAGCAAATGTCAATTTGTACGGTAGAATCAGCAAGGAGATAG ACGAATGCTATGAAAGAATAAATTTTGAAGAAGAAGAACTCGAACACTACCAATACTTGTACAACAAATTTGCTTTCTGT AGCAGTATCATAAACAACGAATCAAATTCAGAGTATTATGAACTGATTTACACAAAAAGTTAA
Upstream 100 bases:
>100_bases TAACAACAACTTTACCCCTGTTTCATTTCAACAAGTGAAGAGAATAATTGAAAATCAAGTGGGACAATTTAATAAGAATA AATGATAAGGAAGATTAACA
Downstream 100 bases:
>100_bases TAACATAAATAGATTATGAAGATACAATATATGAGTGACCTGCATTTGGAGTTCAGCGACAACAGCAGGTGGTTGAAGCA TAATGAATTGCCTGCGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 180; Mature: 179
Protein sequence:
>180_residues MSEYTTIYLRCKEIPLLKYKEHPSYEEYQKLSKEDLMKVNREIDEYNKQVTKSLGCKLFYLSTTPSRELTILPWSPSPSI LTKGLLDEILYFYQEEIDNYKNAIAKNKEDIAKLEVRISKANVNLYGRISKEIDECYERINFEEEELEHYQYLYNKFAFC SSIINNESNSEYYELIYTKS
Sequences:
>Translated_180_residues MSEYTTIYLRCKEIPLLKYKEHPSYEEYQKLSKEDLMKVNREIDEYNKQVTKSLGCKLFYLSTTPSRELTILPWSPSPSI LTKGLLDEILYFYQEEIDNYKNAIAKNKEDIAKLEVRISKANVNLYGRISKEIDECYERINFEEEELEHYQYLYNKFAFC SSIINNESNSEYYELIYTKS >Mature_179_residues SEYTTIYLRCKEIPLLKYKEHPSYEEYQKLSKEDLMKVNREIDEYNKQVTKSLGCKLFYLSTTPSRELTILPWSPSPSIL TKGLLDEILYFYQEEIDNYKNAIAKNKEDIAKLEVRISKANVNLYGRISKEIDECYERINFEEEELEHYQYLYNKFAFCS SIINNESNSEYYELIYTKS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21540; Mature: 21408
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEYTTIYLRCKEIPLLKYKEHPSYEEYQKLSKEDLMKVNREIDEYNKQVTKSLGCKLFY CCCCEEEEEEECCCCEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEE LSTTPSRELTILPWSPSPSILTKGLLDEILYFYQEEIDNYKNAIAKNKEDIAKLEVRISK EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEE ANVNLYGRISKEIDECYERINFEEEELEHYQYLYNKFAFCSSIINNESNSEYYELIYTKS CCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC >Mature Secondary Structure SEYTTIYLRCKEIPLLKYKEHPSYEEYQKLSKEDLMKVNREIDEYNKQVTKSLGCKLFY CCCEEEEEEECCCCEEECCCCCCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCEEEE LSTTPSRELTILPWSPSPSILTKGLLDEILYFYQEEIDNYKNAIAKNKEDIAKLEVRISK EECCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHEEEEE ANVNLYGRISKEIDECYERINFEEEELEHYQYLYNKFAFCSSIINNESNSEYYELIYTKS CCCEEEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA