| Definition | Bacteroides thetaiotaomicron VPI-5482 chromosome, complete genome. |
|---|---|
| Accession | NC_004663 |
| Length | 6,260,361 |
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The map label for this gene is 29349897
Identifier: 29349897
GI number: 29349897
Start: 5905655
End: 5907253
Strand: Reverse
Name: 29349897
Synonym: BT_4489
Alternate gene names: NA
Gene position: 5907253-5905655 (Counterclockwise)
Preceding gene: 29349898
Following gene: 29349896
Centisome position: 94.36
GC content: 34.4
Gene sequence:
>1599_bases ATGAAAAAGATTTTATTAATGCTCGCAAGTGCTTTTTTCATGTTTTCGTGTTCTCAAGAGGAAGGAACTTCTCCTATCAA CGAGAATACAAGTAATTTACCAGTATCGGCAACAGCCGATGCGCAACTCAAATTTGCCAAATTGTTATCACAAGCCGCCT CCGGTAGTATCGAAGTACGCAACTTCTTGAAAAAAGAAGCTTTAGTACAGTTTGACAATGACTACGACATTTTCTATCCA TTAATTAAAGATAAAAAAGTATTTGGCAACCAAAGTTTTAGAGATATATTATTATCATACTGCAAAGAAGAAAACGAATT GAGTCAAATTGAGCAATCTCTTCCCTTGTTAAACATAATGGTTCCAGATCTCACTCTATTTTGGGACTTCAATGCCACAA CATGGGATACAAGTGATAAAGAAATATCAGTATTGTGTAGAGATGACAAAAACAACACACTATATGAAAATGGCGAAAAC ATTGGTAATATGACAAACGGAGATATTCCTGGTTTCCCTTGCCTTGTTGTGAAAAACAATGAACGCATGAAAATTACTAG TGTTAATACAAGATCAGGAGAGGCTACTTATGAATTTATAAGTGATGCTTTTGATGGGAGCAAAAAGGTGCAAACCCGGC ATTATGATGCTGATAATGATTTAGAAGCAACCGAAGATTTGAATAAATATGTTAGTAAAGATGTAGTAGCCACAGCTATT AACGCTTGGCGAGAATTCAAAAACGTCCCTAATGCCTGCCAAAGAGATTATATTTATTATGGTATCAATAAAACAAATAC TCCTGGAAGCTTAAATAGAAATATCAGAGAAAAATTATACCGATTTAGAATTAGTGCTACTGCATTTGGAAGAATCGCAG ATGCCGACGGTGATCAAAGATTACAAGACTTGACCCAAACTAAACGTTACCTTTCAAATGAAGAAATTCTTCAAAATATA TGGACAGATGGAAATTTCGAATTCCGATTCAAGTCCTATATTGCAGGAGAAACAAATAAAGATGCGATGGAACATTTGCT CACATTTTCCGTAAAAGCAAAAGATGTGTTCTCCATAGAAAAGATACATCTTCATCATAAAAACGGTACCGCATTTAGAC AATCAAAGAATTTCTATTCAGTAGATATCAACAATTTAAGATCAAAATGGATTTATCCGGAAAAACTTGAACCCAATAAG GATAACCAAGTTTTCACATTACCATGGGATTTATACAACAAAGCTCTTTCCATTCATATGTATGTAGAAGAATTCGATGT TGATCAGACAATAGAAAAAACAATAACTGTAGTAAATGAATTTACAAACAAAGCAGATTTTTCCATCGAAGGAGGCGGAA GCATAGATAGCGTCAAATTATCTGCCAAATTAGGATATGGTTTTTCACACACCAATACCACAACTAGTAGTACTAAAGTT ACAACTACAGTCGGTTCTGACGAATTAGGAACTCTTTCCTTCTTCTTCTATGACCCTATTATCAGAGCAGAATCTAACAA TACCTATAAACTATATGACGTATCTAGCGGTGATGTGACAGCAACTATCTTACCGATTAATCTTATTATTACCAGATAA
Upstream 100 bases:
>100_bases CTTTATCGTTCAGATAACCCTAAAGATTCTATTATAATCAATGGTTCATACGGAACCAGATAATTTTTATCTATTACTAA CTTTTATAAAAACATGTATT
Downstream 100 bases:
>100_bases AAGATATAAATACAACATATATAGTTTATAAAATTACGCTGATAAGATACTTACTGACTATCTATAAGCCATCTATATCA AATAAAATAACTAGACTTTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 532; Mature: 532
Protein sequence:
>532_residues MKKILLMLASAFFMFSCSQEEGTSPINENTSNLPVSATADAQLKFAKLLSQAASGSIEVRNFLKKEALVQFDNDYDIFYP LIKDKKVFGNQSFRDILLSYCKEENELSQIEQSLPLLNIMVPDLTLFWDFNATTWDTSDKEISVLCRDDKNNTLYENGEN IGNMTNGDIPGFPCLVVKNNERMKITSVNTRSGEATYEFISDAFDGSKKVQTRHYDADNDLEATEDLNKYVSKDVVATAI NAWREFKNVPNACQRDYIYYGINKTNTPGSLNRNIREKLYRFRISATAFGRIADADGDQRLQDLTQTKRYLSNEEILQNI WTDGNFEFRFKSYIAGETNKDAMEHLLTFSVKAKDVFSIEKIHLHHKNGTAFRQSKNFYSVDINNLRSKWIYPEKLEPNK DNQVFTLPWDLYNKALSIHMYVEEFDVDQTIEKTITVVNEFTNKADFSIEGGGSIDSVKLSAKLGYGFSHTNTTTSSTKV TTTVGSDELGTLSFFFYDPIIRAESNNTYKLYDVSSGDVTATILPINLIITR
Sequences:
>Translated_532_residues MKKILLMLASAFFMFSCSQEEGTSPINENTSNLPVSATADAQLKFAKLLSQAASGSIEVRNFLKKEALVQFDNDYDIFYP LIKDKKVFGNQSFRDILLSYCKEENELSQIEQSLPLLNIMVPDLTLFWDFNATTWDTSDKEISVLCRDDKNNTLYENGEN IGNMTNGDIPGFPCLVVKNNERMKITSVNTRSGEATYEFISDAFDGSKKVQTRHYDADNDLEATEDLNKYVSKDVVATAI NAWREFKNVPNACQRDYIYYGINKTNTPGSLNRNIREKLYRFRISATAFGRIADADGDQRLQDLTQTKRYLSNEEILQNI WTDGNFEFRFKSYIAGETNKDAMEHLLTFSVKAKDVFSIEKIHLHHKNGTAFRQSKNFYSVDINNLRSKWIYPEKLEPNK DNQVFTLPWDLYNKALSIHMYVEEFDVDQTIEKTITVVNEFTNKADFSIEGGGSIDSVKLSAKLGYGFSHTNTTTSSTKV TTTVGSDELGTLSFFFYDPIIRAESNNTYKLYDVSSGDVTATILPINLIITR >Mature_532_residues MKKILLMLASAFFMFSCSQEEGTSPINENTSNLPVSATADAQLKFAKLLSQAASGSIEVRNFLKKEALVQFDNDYDIFYP LIKDKKVFGNQSFRDILLSYCKEENELSQIEQSLPLLNIMVPDLTLFWDFNATTWDTSDKEISVLCRDDKNNTLYENGEN IGNMTNGDIPGFPCLVVKNNERMKITSVNTRSGEATYEFISDAFDGSKKVQTRHYDADNDLEATEDLNKYVSKDVVATAI NAWREFKNVPNACQRDYIYYGINKTNTPGSLNRNIREKLYRFRISATAFGRIADADGDQRLQDLTQTKRYLSNEEILQNI WTDGNFEFRFKSYIAGETNKDAMEHLLTFSVKAKDVFSIEKIHLHHKNGTAFRQSKNFYSVDINNLRSKWIYPEKLEPNK DNQVFTLPWDLYNKALSIHMYVEEFDVDQTIEKTITVVNEFTNKADFSIEGGGSIDSVKLSAKLGYGFSHTNTTTSSTKV TTTVGSDELGTLSFFFYDPIIRAESNNTYKLYDVSSGDVTATILPINLIITR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60547; Mature: 60547
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKILLMLASAFFMFSCSQEEGTSPINENTSNLPVSATADAQLKFAKLLSQAASGSIEVR CHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHH NFLKKEALVQFDNDYDIFYPLIKDKKVFGNQSFRDILLSYCKEENELSQIEQSLPLLNIM HHHHHHHHEEECCCCEEEEEEECCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEE VPDLTLFWDFNATTWDTSDKEISVLCRDDKNNTLYENGENIGNMTNGDIPGFPCLVVKNN ECCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEECC ERMKITSVNTRSGEATYEFISDAFDGSKKVQTRHYDADNDLEATEDLNKYVSKDVVATAI CEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH NAWREFKNVPNACQRDYIYYGINKTNTPGSLNRNIREKLYRFRISATAFGRIADADGDQR HHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHEEECHHHCCEEECCCCHHH LQDLTQTKRYLSNEEILQNIWTDGNFEFRFKSYIAGETNKDAMEHLLTFSVKAKDVFSIE HHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHEEEECCCCEEEE KIHLHHKNGTAFRQSKNFYSVDINNLRSKWIYPEKLEPNKDNQVFTLPWDLYNKALSIHM EEEEECCCCCEEECCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCEEEEEE YVEEFDVDQTIEKTITVVNEFTNKADFSIEGGGSIDSVKLSAKLGYGFSHTNTTTSSTKV EEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCEE TTTVGSDELGTLSFFFYDPIIRAESNNTYKLYDVSSGDVTATILPINLIITR EEEECCCCCCEEEEEEECCEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEC >Mature Secondary Structure MKKILLMLASAFFMFSCSQEEGTSPINENTSNLPVSATADAQLKFAKLLSQAASGSIEVR CHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCEEECCCCHHHHHHHHHHHCCCCHHHH NFLKKEALVQFDNDYDIFYPLIKDKKVFGNQSFRDILLSYCKEENELSQIEQSLPLLNIM HHHHHHHHEEECCCCEEEEEEECCCHHCCCCHHHHHHHHHHCCCHHHHHHHHHCCEEEEE VPDLTLFWDFNATTWDTSDKEISVLCRDDKNNTLYENGENIGNMTNGDIPGFPCLVVKNN ECCEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCCCCCCCCCCEEEEECC ERMKITSVNTRSGEATYEFISDAFDGSKKVQTRHYDADNDLEATEDLNKYVSKDVVATAI CEEEEEEECCCCCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHH NAWREFKNVPNACQRDYIYYGINKTNTPGSLNRNIREKLYRFRISATAFGRIADADGDQR HHHHHHHCCCCHHHCCCEEEECCCCCCCCCCCHHHHHHHHHEEECHHHCCEEECCCCHHH LQDLTQTKRYLSNEEILQNIWTDGNFEFRFKSYIAGETNKDAMEHLLTFSVKAKDVFSIE HHHHHHHHHHCCHHHHHHHHCCCCCEEEEEEEEECCCCCHHHHHHHHHEEEECCCCEEEE KIHLHHKNGTAFRQSKNFYSVDINNLRSKWIYPEKLEPNKDNQVFTLPWDLYNKALSIHM EEEEECCCCCEEECCCCEEEEEHHHHHHCCCCCCCCCCCCCCEEEEECHHHHCCEEEEEE YVEEFDVDQTIEKTITVVNEFTNKADFSIEGGGSIDSVKLSAKLGYGFSHTNTTTSSTKV EEECCCCHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCEE TTTVGSDELGTLSFFFYDPIIRAESNNTYKLYDVSSGDVTATILPINLIITR EEEECCCCCCEEEEEEECCEEEECCCCEEEEEEECCCCEEEEEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA